FC921419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 6.632e-79 Identity = 144/204 (70.59%), Postives = 162/204 (79.41%), Query Frame = 1 Query: 37 MSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATE-DLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAITL 645 MSNIVVLDNGGGLIKAG GGERDP IPNC+Y+PLSSKKFIHPSP + E DLTSAAV RPIDRGYLINSDLQR+IW+HLF TE ++PS+QR TDELVFEDF F SL++A P SLVHLYEASR+P +LS+TQCSLVVDCGFSFTHA PV NFT+N+A+KRIDL GKA TNYLKELVSYR+I + Sbjct: 1 MSNIVVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINV 204 HSP 2 Score: 23.0978 bits (48), Expect = 6.632e-79 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 642 VMDETFIIDD 671 VMDETF++DD Sbjct: 204 VMDETFLVDD 213
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.288e-60 Identity = 115/202 (56.93%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 40 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAITL 645 S +VVLDNGGGL+KAG GG+ +P +PNCM +P SKK++ A D+T + RPIDRGYLIN ++QR++W + EP F P++Q ATDELVFE+ FKSL VAD PSLVHLYEASR+P L QCSLVVDCGFSFTHA+PV QNFT+NYAV+R+DL GKALTNYLKEL+SYR++ + Sbjct: 5 SGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWLVADQLQAQDV-DVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQP--SLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNV 203
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.288e-60 Identity = 115/202 (56.93%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 40 SNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXXTEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAITL 645 S +VVLDNGGGL+KAG GG+ +P +PNCM +P SKK++ A D+T + RPIDRGYLIN ++QR++W + EP F P++Q ATDELVFE+ FKSL VAD PSLVHLYEASR+P L QCSLVVDCGFSFTHA+PV QNFT+NYAV+R+DL GKALTNYLKEL+SYR++ + Sbjct: 5 SGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWLVADQLQAQDV-DVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQP--SLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNV 203
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 71/203 (34.98%), Postives = 104/203 (51.23%), Query Frame = 1 Query: 46 IVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSET------QCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 ++++DNG IKAG G +PN + R + K+ +DL+ RP ++G L+N D +R IW LF TEP F LP+I D+++FE+F F+S F P +L+ PYG L E+ QC++V+D G+S+TH P+ V VKRID+ GK LTN+LK L+S+R Sbjct: 6 VLIIDNGAYEIKAGISGVDWEPRVLPNSIARSRTEKRVYVGDEI--DNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALI--------PYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFR 198
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.958e-23 Identity = 67/218 (30.73%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 25 SSSEMSNIVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSL--VHL------YEASRRPYGL------LSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +S+ + ++++DNGG +K P + +PN + + + K I D + P+++GY+ N L+++IW + F TE +L +++ E+V+E + FKSL++ +L VH+ Y+ + L L ++ C LVVDCG+S TH P FQN +NYA+KR ++ GK LTNYLKE+VS+R Sbjct: 23 ASNTNNKVLIIDNGGHTLKIATNNPSQPHIIVPNQVGKVKNEKHQIMGEELINY--NDPSEVRSRNPMEKGYITNWGLEKEIWDYAFKRDDMKIKPQDYNLLLTEAPNSLDDLRKTMYEVVYEQYKFKSLYLTTSSTLGLVHIKQQLLQYQQQQHQPPLDASMISLLKSPCHLVVDCGYSSTHIIPHFQNTRLNYAIKRFNIGGKLLTNYLKEIVSFR 238
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23 Identity = 67/201 (33.33%), Postives = 98/201 (48.76%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX--TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHL----YEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYR 633 +VLDNG IKAG G + V IPNC+ R + + A D T+ R ++GYL++ + +W + T+P+F +PSI+ T +LVFE+F F + P L+ + ++ +C LV+D G+SFTH PV AVKR+D+ GK LTNYLKE++SYR Sbjct: 8 IVLDNGAYHIKAGFAGGK--VVEIPNCLTRSKDGNRLFLGNELANC--NDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYR 204
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20 Identity = 61/198 (30.81%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 +VLDNG K G+ D IPNC +R +++ + +D + P +GYL+N D+QR +W +LF TEP F SIQ + +E++FE++ F+++ + +L ++ R + C ++VD G+SFTH P ++ A+ RI++ GK LTN+LKE++SYR + Sbjct: 4 LVLDNGAYNAKIGYS--HDSVSVIPNCQFRSKTARLKTFTA-NQIDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQL 193
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20 Identity = 61/198 (30.81%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 +VLDNG K G+ E IPNC +R +++ + +D + P +GYL+N D+QR +W +LF TEP F SIQ + +E++FE++ F+++ + +L ++ R + C ++VD G+SFTH P ++ A+ RI++ GK LTN+LKE++SYR + Sbjct: 4 LVLDNGAYNAKIGYSHEN--VSVIPNCQFRSKTARLKTFTA-NQIDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQL 193
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20 Identity = 62/202 (30.69%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 46 IVVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHL-YEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAITL 645 +VVLDNG K G + +P V +PNC+ + S ++ D ++ RGYL+N Q+ +W ++F TEP SIQ AT E++FE++ ++ L Y A + C +++D G+SFTH P V ++RID+ GKALTN LKEL+SYR + + Sbjct: 5 VVVLDNGAHTAKVGLANQDEPHV-VPNCIMKAKSERRRAFVG-NQIDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNC-IIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLNV 203
BLAST of FC921419 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20 Identity = 60/198 (30.30%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 49 VVLDNGGGLIKAGHGGERDPAVTIPNCMYRPLSSKKFIHPSPTAASATEDLTSAAVHRPIDRGYLINSDLQRDIWAHLFXXXXXXXXXXXXXXX-TEPLFALPSIQRATDELVFEDFNFKSLFVADPPSLVHLYEASRRPYGLLSETQCSLVVDCGFSFTHAAPVFQNFTVNYAVKRIDLXGKALTNYLKELVSYRAI 639 +VLDNG K G+ IPNC +R +++ + +D + P +GYL+N D+QR +W +LF TEP F SIQ + +E++FE++ F+++ + +L ++ R + C ++VD G+SFTH P ++ A+ RI++ GK LTN+LKE++SYR + Sbjct: 4 LVLDNGAYNAKIGYSHAH--VSVIPNCQFRSKTARLKTFTA-NQLDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFVDTNIIITEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGAL-----SAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYRQL 193 The following BLAST results are available for this feature:
BLAST of FC921419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 369
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921419 ID=FC921419; Name=FC921419; organism=Citrus clementina; type=EST; length=671bpback to top |