FC921422

Overview
NameFC921422
Unique NameFC921422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14307 contig Ccv1_Contig14307:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.424e-58
Identity = 112/190 (58.95%), Postives = 139/190 (73.16%), Query Frame = 1
Query:  133 GELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            G+L+ NFY +SC  AEDIVR I WK   +N  L  KL+R+H+HDCFVRGCDAS+L++S AG   +E++A PNLSL GFE+I+EIK  LE RCP  VSCADI+ LA RD+VS++F++P LW V TGR DG VS+A EA   LPS  ANF+ L+K F +  L V DLV LSG HTIG++HC  F  RL NFT
Sbjct:   44 GKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERP-LWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFT 232          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.165e-58
Identity = 120/205 (58.54%), Postives = 151/205 (73.66%), Query Frame = 1
Query:   85 LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            L V   + GI+G  Q  +L+ NFY +SC +AE IV+     + ++ P L A LIRMHFHDCFVRGCD SVLINST+GN AERDA PNL++ GF  I+ IKS LE++CPGIVSCADI+ALA+RD+V F    P+ W V TGRRDG +S AAEA   +P P +N + L+  F ++GL +KDLV+LSG HTIGVSHC+ F+NRLYNFT
Sbjct:    9 LSVSFFLVGIVGPIQA-QLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFT-GGPN-WSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFT 209          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.530e-55
Identity = 113/209 (54.07%), Postives = 148/209 (70.81%), Query Frame = 1
Query:   76 GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            G  LL+ LV+ G++   +  +L+  FY  +C  AE IV+ +  ++  + P L A LIRMHFHDCFVRGCD S+LIN+T+ N+  E+ A PNL++ GF+ I+++KS LES+CPGIVSCADI+ LATRDS+      P  W V TGRRDG +S  AEA   +P PF NF+ L   F ++GL VKDLV+LSG HTIGVSHC+ FSNRL+NFT
Sbjct:    5 GLALLMILVIQGLVTFSEA-QLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSI-VAIGGPT-WNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFT 210          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53
Identity = 109/207 (52.66%), Postives = 141/207 (68.12%), Query Frame = 1
Query:   85 LLVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            +L  +V+  ++GV       L  ++YR  C  AE+IVR +T +  +    L AKL+RMHFHDCFVRGCD SVL+ S A N AERDAVPNL+L G+EV++  K+ LE +CP ++SCAD++AL  RD+V+        W V  GRRDG +S   +A L LPSPFA+   LKKNF +KGL  KDLVVLSGGHTIG+S C   ++RLYNFT
Sbjct:    6 ILALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKS-AKNDAERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVI--GGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFT 209          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51
Identity = 109/207 (52.66%), Postives = 138/207 (66.67%), Query Frame = 1
Query:   85 LLVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            + V +VV  +IG+ +  E  L+ NFY  SC +AE I+      +  + P L A LIRMHFHDCFVRGCD SVLINST+GN AERDA PNL+L GF  +  IK+ LE  CP  VSCADI+AL  RD+V         W V TGRRDG +S   EA   +P P +NF+ L++ F ++GL +KDLV+LSG HTIGVSHC+  + RLYNF+
Sbjct:    9 IAVVVVVTVLIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGN-AERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPS--WSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFS 212          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.860e-50
Identity = 103/209 (49.28%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   73 AGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            A S +++ L++     +    +L + FY +SC S E +VR    +   + P L   L+RMHFHDCFVRGCD SVL++S   + AE+DA PN +L GF  +  +K+ +E  CPG VSCAD++AL  RD+V     K   W V  GRRDG VSIA E D  LP P ANF+EL + F  K L +KDLVVLS GHTIG SHC  F++RLYNFT
Sbjct:    2 ASSRVILALLLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAV--WLSKGPFWAVPLGRRDGRVSIANETD-QLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFT 207          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.741e-48
Identity = 103/211 (48.82%), Postives = 134/211 (63.51%), Query Frame = 1
Query:   67 AGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            A +  L++ CL +  +        L+  FY  +C   E IV+ + +      P L A L+RM FHDCFVRGCD SVL++    N+ E+ AVPNLSL GF +I++ K+ LE  CPGIVSC+DI+AL  RD++    + P  WEV TGRRDG VS   E +L  PSPF N ++L  +F  KGL  KDLV+LSGGHTIG+ HC   +NRLYNFT
Sbjct:    2 AASKRLVVSCLFLVLLFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKP-NNQGEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAM-VALEGPS-WEVETGRRDGRVSNINEVNL--PSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFT 207          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 99/208 (47.60%), Postives = 136/208 (65.38%), Query Frame = 1
Query:   73 AGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            A  L L+ +V+F +    Q   L  ++Y  +C  A+ IV +   K  +++  +PA L+RMHFHDCFVRGCD SVL++S   NKAE+D  PN+SL  F VI+  K  LE +CPGIVSCADI++LA RD+V+        W V  GR+DG +S A E    LP+P  N S+L++NF  +GL++ DLV LSGGHT+G +HC+ F NRL+ F
Sbjct:    3 AHMLNLLVIVIFVVSFDVQA--LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVA--LSGGPTWAVPKGRKDGRISKAIET-RQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKF 205          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47
Identity = 94/206 (45.63%), Postives = 135/206 (65.53%), Query Frame = 1
Query:   88 LVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFT 699
            L+  ++F ++ + +  E  L  ++Y  SC +AE I+          +P +PA+L+RM FHDCF+RGCDAS+L++ST  N+AE+D  PN+S+  F VI + K +LE  CP  VSCAD++A+A RD V+        W VL GR+DG++S A E    LP P  N S+L ++F  +GL+VKD+V LSGGHTIG SHC+ F +RL NF+
Sbjct:    7 LIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVT--LSGGPYWSVLKGRKDGTISRANET-RNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFS 209          
BLAST of FC921422 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 1
Query:   97 LVVFGIIGVC------QGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNF 696
            LV   ++G+C       G   R  FY  +C  AE IVRS    +  S+P L AK++RMHFHDCFV+GCD S+LI   +G   E+ A  NL L G+E+I++ K++LE+ CPG+VSCADI+ALA RDSV         W+V TGRRDG VS A++    LP+P  +    K+ F  KGL  +DLV L GGHTIG S C FFSNRL+NF
Sbjct:   12 LVFVFMLGLCIGITTVHGQGTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILI---SGPATEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLS--WQVPTGRRDGRVSQASDVS-NLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNF 211          
The following BLAST results are available for this feature:
BLAST of FC921422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER24_ARATH2.424e-5858.95Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER3_ARATH3.165e-5858.54Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH9.530e-5554.07Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1_ARATH2.347e-5352.66Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER30_ARATH2.870e-5152.66Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ORYSJ1.860e-5049.28Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER27_ARATH1.741e-4848.82Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER64_ARATH2.514e-4747.60Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER66_ARATH9.552e-4745.63Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER2_ARAHY1.629e-4649.51Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32104G08EF RVDevelopN Citrus clementina cDNA clone C32104G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921422 ID=FC921422; Name=FC921422; organism=Citrus clementina; type=EST; length=701bp
GAAGTAAGCTTGCAGCGTTAAACTCATTTCTCTTAGTAACTAGTGACATT
AAAGATGAAGAAAGCCGCTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAG
TAGTTTTTGGTATTATAGGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAAT
TTCTACAGGGACAGCTGTAAATCTGCTGAAGATATCGTCAGGAGCATCAC
CTGGAAAAATGCCGCCAGTAACCCTGACTTGCCGGCCAAGCTTATCAGAA
TGCATTTCCATGACTGCTTTGTTAGGGGTTGCGATGCGTCGGTTTTGATA
AACTCAACTGCAGGTAACAAAGCAGAGAGGGATGCAGTTCCGAATCTATC
TTTGGGAGGTTTCGAAGTTATTAATGAGATTAAATCGGAGCTCGAGAGCA
GGTGTCCAGGAATTGTTTCTTGTGCCGATATCGTAGCTTTGGCTACAAGG
GATTCTGTTTCATTCCAATTTCAAAAACCGGACCTGTGGGAAGTGCTCAC
CGGTAGAAGAGATGGCAGTGTGTCCATAGCTGCTGAGGCCGATCTGCTGC
TTCCTTCACCTTTTGCCAACTTCAGTGAACTCAAGAAAAATTTTAACGAC
AAAGGTCTCACTGTCAAAGATCTTGTAGTCCTTTCAGGTGGCCACACAAT
CGGAGTTTCGCACTGCACCTTCTTCAGCAACAGGCTCTACAATTTCACAG
G
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