FC921431

Overview
NameFC921431
Unique NameFC921431
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15114 contig Ccv1_Contig15114:12..661. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.765e-90
Identity = 107/113 (94.69%), Postives = 108/113 (95.58%), Query Frame = 3
Query:   81 MAAIASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKKP 419
            MAA+ASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK P
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNP 113          

HSP 2 Score: 141.739 bits (356), Expect = 3.765e-90
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 1
Query:  409 AKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            +KNPNIQIAIIEQSVSPGGGAWL GQLFSAMVVRKPAHIFLDELGI YDEQD++VVIKHAALFTSTIMSKLLARP
Sbjct:  110 SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARP 184          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 8.975e-62
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 1
Query:  409 AKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            +KNP++Q+AIIEQSVSPGGGAWL GQLFS MVVRKPAH+FLDELGI YDEQD++VVIKHAALFTSTIMSKLLARP
Sbjct:  106 SKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARP 180          

HSP 2 Score: 122.479 bits (306), Expect = 8.975e-62
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 3
Query:  147 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKKP 419
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSK P
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNP 109          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.526e-61
Identity = 63/75 (84.00%), Postives = 73/75 (97.33%), Query Frame = 1
Query:  409 AKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            +KNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+VRKPAH+FLDE+G+ YDEQD++VV+KHAALFTSTIMSKLLARP
Sbjct:  103 SKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARP 177          

HSP 2 Score: 119.398 bits (298), Expect = 1.526e-61
Identity = 69/114 (60.53%), Postives = 83/114 (72.81%), Query Frame = 3
Query:   81 MAAIASTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKKP 419
            MAAIAST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SK P
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNP 106          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.246e-54
Identity = 57/75 (76.00%), Postives = 70/75 (93.33%), Query Frame = 1
Query:  409 AKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            +K+P + +AI+EQSVSPGGGAWL GQLFSAMVVR+PAH+FLDELG+GYDE + +VV+KHAALFTST+MS+LLARP
Sbjct:  106 SKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARP 180          

HSP 2 Score: 106.301 bits (264), Expect = 1.246e-54
Identity = 62/109 (56.88%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  120 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKKP 419
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK P
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDP 109          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.597e-54
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1
Query:  409 AKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            +K+P + IAI+EQSVSPGGGAWL GQLFSAMVVRKPAH+FLDELG+ YDE + +VVIKHAALFTST+MS LLARP
Sbjct:  109 SKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARP 183          

HSP 2 Score: 107.457 bits (267), Expect = 3.597e-54
Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 3
Query:  120 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKKP 419
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK P
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDP 112          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.607e-35
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 1
Query:  412 KNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            K P+++IAIIE SVSPGGGAWL GQLFSAM++RKPA  FL E+G+ Y+++ ++VV+KHAALFTSTIMSK+L  P
Sbjct:   93 KRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMP 166          

HSP 2 Score: 62.003 bits (149), Expect = 2.607e-35
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:  267 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKK 416
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L KK
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKK 93          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.421e-35
Identity = 48/74 (64.86%), Postives = 65/74 (87.84%), Query Frame = 1
Query:  412 KNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            + P+++IAIIE SV+PGGGAWL GQLFSAMVVRKPA +FL+E+G+ Y+++  +VV+KHAALFTST+M++ LA P
Sbjct:   98 RRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALP 171          

HSP 2 Score: 61.6178 bits (148), Expect = 4.421e-35
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 3
Query:  234 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKK 416
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY +  +
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTR 98          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.273e-34
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 1
Query:  412 KNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            K P+++IAIIE SVSPGGGAWL GQLFSAMV+RKPA  FL E+G+ Y+++ ++VV+KHAALFTSTIMSK+L  P
Sbjct:   97 KRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLP 170          

HSP 2 Score: 59.6918 bits (143), Expect = 1.273e-34
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 3
Query:  267 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKK 416
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L KK
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKK 97          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.950e-33
Identity = 48/74 (64.86%), Postives = 65/74 (87.84%), Query Frame = 1
Query:  418 PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDE--QDSHVVIKHAALFTSTIMSKLLARP 633
            P+++IAI+E SVSPGGGAWL GQLFSAMV+R+PA +FL+ELG+ Y+E    ++VV+KHA+LFTST+MSK+L+ P
Sbjct:   99 PDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFP 172          

HSP 2 Score: 60.077 bits (144), Expect = 3.950e-33
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 3
Query:  267 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK 413
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAK 96          
BLAST of FC921431 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.721e-33
Identity = 43/72 (59.72%), Postives = 60/72 (83.33%), Query Frame = 1
Query:  418 PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIGYDEQDSHVVIKHAALFTSTIMSKLLARP 633
            P+++I I+E +V+PGGG WL GQL SAMV RKPA  FLD++G+ Y+++ + VV+KHAALFTST++SK+LA P
Sbjct:  104 PDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMP 175          

HSP 2 Score: 63.5438 bits (153), Expect = 8.721e-33
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 3
Query:  189 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL 407
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYAL 99          
The following BLAST results are available for this feature:
BLAST of FC921431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_CITSI3.765e-9094.69Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL8.975e-6286.67Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH1.526e-6184.00Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI42_MAIZE1.246e-5476.00Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI41_MAIZE3.597e-5478.67Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI4_FUSOX2.607e-3567.57Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI2_SCHPO4.421e-3564.86Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSSH1.273e-3468.92Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR3.950e-3364.86Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA8.721e-3359.72Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionC32104H05EF RVDevelopN Citrus clementina cDNA clone C32104H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921431 ID=FC921431; Name=FC921431; organism=Citrus clementina; type=EST; length=651bp
TCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAG
CAGGGGAAGGAGGGGTAAAAAAAAAAAAACATGGCAGCCATAGCTTCTAC
AGCTTTCGCTCCTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCAT
CCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATC
AAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCC
TTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTT
CTCGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTATGCTGAC
ACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTA
TGAGCTCAGCAAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCT
GTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCAT
GGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGGCT
ACGATGAGCAAGACAGCCATGTTGTGATCAAGCATGCAGCGCTGTTCACC
TCCACTATAATGAGCAAGCTCCTGGCCCGCCCCACGTCAAGCTCTTTATG
C
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