FC921479

Overview
NameFC921479
Unique NameFC921479
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.061e-74
Identity = 131/182 (71.98%), Postives = 155/182 (85.16%), Query Frame = 2
Query:   95 LTLALLVLAMGSST---NAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            L L + +L  G +     AQL+TNFY+ +C NLL TV++ V+SA++ EARMGAS+LRLFFHDCFVNGCDGS+LLD+TSSFTGE+NA  NRNSARGF VIDNIKSAVEKACPGVVSCADILAI ARDSVV LGGP+W VK+GRRDARTAS +AANS IPAPTS+L+QLIS F+A+GLS R ++
Sbjct:   10 LVLVVTLLLQGDNNYVVEAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMV 191          

HSP 2 Score: 38.5058 bits (88), Expect = 2.061e-74
Identity = 15/21 (71.43%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIGQ+RCT+FR
Sbjct:  188 RDMVALSGAHTIGQSRCTNFR 208          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 1.209e-71
Identity = 129/186 (69.35%), Postives = 148/186 (79.57%), Query Frame = 2
Query:   74 ASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            +SF    + L +L L  GSS+ AQLSTNFY+ TC  +  TVKS VQSA+SKE RMGASLLRLFFHDCFVNGCD SVLLD+TSSFTGE+ A  N+NS RG  VIDNIKS VE  CPGVVSCADI+AI ARDSVVILGGP W VKLGRRD++TASLS AN+ IP PTS+L+ LIS+F A GLS R ++
Sbjct:    4 SSFSIVVVALGVLALFAGSSS-AQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMV 188          

HSP 2 Score: 40.817 bits (94), Expect = 1.209e-71
Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIGQARCTSFR
Sbjct:  185 RDMVALSGAHTIGQARCTSFR 205          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 4.979e-70
Identity = 122/163 (74.85%), Postives = 145/163 (88.96%), Query Frame = 2
Query:  143 QLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            QL+TNFY+ +C NLL TVKS V+SA+S + RMGAS+LRLFFHDCFVNGCDGS+LLD+TSSFTGE+NA  NRNSARGF VI++IKSAVEKACPGVVSCADILAI ARDSVV LGGP+W VK+GRRDA+TAS +AANS IPAP+ +L+QLIS F+A+GLS R ++
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMV 163          

HSP 2 Score: 36.5798 bits (83), Expect = 4.979e-70
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIGQ+RC +FR
Sbjct:  160 RDMVALSGAHTIGQSRCVNFR 180          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.918e-64
Identity = 113/176 (64.20%), Postives = 138/176 (78.41%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGI-PAPTSNLNQLISRFNALGLSNRTLL 631
            L ++ +GS   AQL T+FY+++C +LLPTV+ VVQ  ++KE R+ ASLLRLFFHDCFVNGCD S+LLD+T SF GEK A  N NS RG+EVID IKS VE+ CPGVVSCADILAITARDSV+++GG  W VKLGRRD+ TAS S ANSG+ P PTS L+ LI+ F A GLS R ++
Sbjct:   17 LFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMV 192          

HSP 2 Score: 37.7354 bits (86), Expect = 4.918e-64
Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIGQARC +FR
Sbjct:  189 RDMVALSGAHTIGQARCVTFR 209          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 5.361e-63
Identity = 116/175 (66.29%), Postives = 135/175 (77.14%), Query Frame = 2
Query:  107 LLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            + ++ +GS   AQLS+NFYA  C N L T+KS V SA++KEARMGASLLRL FHDCFV GCD SVLLD+TS+FTGEK A  N NS RGFEVID IKS VE  CPGVVSCADILA+ ARDSVV LGG SW V LGRRD+ TASLS+ANS +PAP  NL+ LIS F+  G + + L+
Sbjct:   14 MCLIGLGS---AQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELV 185          

HSP 2 Score: 35.8094 bits (81), Expect = 5.361e-63
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            ++LV L+G HTIGQA+CT+FR
Sbjct:  182 KELVTLSGAHTIGQAQCTAFR 202          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.436e-62
Identity = 109/180 (60.56%), Postives = 140/180 (77.78%), Query Frame = 2
Query:   95 LTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSG-IPAPTSNLNQLISRFNALGLSNRTLL 631
            + L ++++ + S + AQL+ +FY  +C +L   V+ VV+ A+++E RMGASLLRLFFHDCFVNGCDGS+LLD+T SF GEK +  + NS RGFEVID IK  VEK CPG+VSCADILAITARDSV++LGGP W VKLGRRD+ TA+ +AANSG IP P + L+ LI+RF A GLS R ++
Sbjct:    4 VVLLMMIMMLASQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMV 183          

HSP 2 Score: 34.6538 bits (78), Expect = 3.436e-62
Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  619 QDLVALAGGHTIGQARCTSFR 681
            +D+VAL+G HTIG+A+C +FR
Sbjct:  180 RDMVALSGAHTIGRAQCVTFR 200          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.152e-55
Identity = 95/181 (52.49%), Postives = 134/181 (74.03%), Query Frame = 2
Query:   89 FFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            F ++L ++V ++  +++AQL+  FY+ TC N    V+S +Q A+  + R+GASL+RL FHDCFVNGCD S+LLD+T S   EKNA  N NSARGF V+DNIK+A+E ACPGVVSC+D+LA+ +  SV + GGPSW V LGRRD+ TA+L+ ANS IP+P  +L+ +  +F+A+GL+   L+
Sbjct:   13 FIISLIVIVSSIFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLV 193          

HSP 2 Score: 31.187 bits (69), Expect = 2.152e-55
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            DLVAL+G HT G+ARC  F
Sbjct:  191 DLVALSGAHTFGRARCGVF 209          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.401e-55
Identity = 113/204 (55.39%), Postives = 141/204 (69.12%), Query Frame = 2
Query:   74 ASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLLL*QVDIQSDRRGAHHSGL 685
            +S F     + LL LA  +  +AQLS  FY+ +C   L T+K+ V +A+++EARMGASLLRL FHDCFV GCDGSVLL++T++FTGE+ AN N  S RGF V+DNIK+ VE  CPGVVSCADILA+ ARDSVV LGGPSW+V LGRRD+ TASL+ ANS +PAP+ +L  L + F    LS   L+           GAH  GL
Sbjct:    3 SSSFTSLSVMVLLCLAAAAVASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVA--------LSGAHTIGL 198          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.796e-54
Identity = 101/188 (53.72%), Postives = 132/188 (70.21%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLAMGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNT-SSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGLSNRTLL 631
            MASF    L +AL +    S +NAQLS+ FY+ TC N+   V++VVQ A+  +AR+G SL+RL FHDCFV+GCDGS+LLDN  ++   EK+A  N NS RGF+V+DNIK+AVE ACPGVVSC DILA+ +  SV + GGPSW V LGRRD RTA+   AN+ +P+P  NL  L  +F  +GL+   L+
Sbjct:    1 MASFSPL-LAMALAIFIFSSHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLV 187          

HSP 2 Score: 31.187 bits (69), Expect = 1.796e-54
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSF 678
            DLVAL+G HT G+A+C +F
Sbjct:  185 DLVALSGAHTFGRAQCRTF 203          
BLAST of FC921479 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 3.318e-53
Identity = 95/185 (51.35%), Postives = 125/185 (67.57%), Query Frame = 2
Query:   71 MASFFKFFLTLALLVLA----MGSSTNAQLSTNFYANTCKNLLPTVKSVVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDNTSSFTGEKNANANRNSARGFEVIDNIKSAVEKACPGVVSCADILAITARDSVVILGGPSWQVKLGRRDARTASLSAANSGIPAPTSNLNQLISRFNALGL 613
            MA    F L L+L+          S   +L   +YA++C  +   V+SVV  A+++E RM ASLLRL FHDCFV GCDGS+LLD++     EKN+N N  SARGF+V+D IK+ +EK CPG VSCAD+L + ARDS V+ GGPSW V LGRRD+R+ASLS +N+ IPAP +    ++S+FN  GL
Sbjct:    1 MARLTSFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGL 185          

HSP 2 Score: 36.965 bits (84), Expect = 3.318e-53
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  622 DLVALAGGHTIGQARCTSFR 681
            DLVAL+G HTIG +RCTSFR
Sbjct:  189 DLVALSGSHTIGFSRCTSFR 208          
The following BLAST results are available for this feature:
BLAST of FC921479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER52_ARATH2.061e-7471.98Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER4_VITVI1.209e-7169.35Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PERP7_BRARA4.979e-7074.85Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER68_ARATH4.918e-6464.20Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER1_ARAHY5.361e-6366.29Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER67_ARATH3.436e-6260.56Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER53_ARATH2.152e-5552.49Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER70_MAIZE5.401e-5555.39Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER15_IPOBA1.796e-5453.72Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER49_ARATH3.318e-5351.35Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32105D10EF RVDevelopN Citrus clementina cDNA clone C32105D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921479 ID=FC921479; Name=FC921479; organism=Citrus clementina; type=EST; length=689bp
GAACCAAATCAACTTCAAATTCTACAGTACTACTACTGTATTCTATTGAT
GATTAGCTAGCTATCAATCAATGGCTTCGTTTTTCAAGTTCTTTCTGACT
TTGGCACTCCTTGTGCTTGCCATGGGGAGCAGCACAAACGCTCAACTCTC
TACAAATTTCTACGCAAACACTTGCAAAAACCTCCTCCCCACTGTGAAAT
CTGTCGTGCAATCTGCTATTTCAAAAGAGGCTCGCATGGGCGCCTCTCTC
CTTCGCTTGTTCTTCCACGATTGCTTCGTTAACGGATGCGATGGATCAGT
TCTACTGGACAACACATCATCTTTCACTGGAGAGAAAAATGCGAATGCCA
ATCGTAACTCCGCCCGCGGATTCGAGGTCATCGACAACATTAAGTCCGCA
GTTGAGAAAGCTTGCCCCGGTGTGGTCTCTTGTGCTGATATATTAGCCAT
TACTGCTCGAGACTCAGTTGTTATACTTGGAGGCCCAAGCTGGCAAGTAA
AACTCGGAAGGAGAGATGCTAGAACTGCAAGCCTATCTGCTGCTAATAGC
GGCATTCCAGCTCCTACCTCAAACTTGAATCAACTCATCTCTAGGTTCAA
CGCTCTCGGACTTTCCAACAGGACCTTGTTGCTTTAGCAGGTGGACATAC
AATCGGACAGGCGAGGTGCACATCATTCAGGNCTCACAT
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