FC921491
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 7.310e-105 Identity = 179/204 (87.75%), Postives = 188/204 (92.16%), Query Frame = 3
Query: 69 MPSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
MP IPEEPLLA +PDRFCMFPI+YPQIWEMYKKA ASFWTAEEVDLS D RHWE LT E+HF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLE+YIKDSDEK+RLF A+ET PCV KKA WAL WIDGSETFAERL+AFACVE IFFSGSFCAIFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 204 HSP 2 Score: 31.187 bits (69), Expect = 7.310e-105 Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query: 674 GSHCDFACLLYSL 712
G HCDFACLLYSL
Sbjct: 203 GLHCDFACLLYSL 215
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 6.769e-100 Identity = 170/205 (82.93%), Postives = 187/205 (91.22%), Query Frame = 3
Query: 69 MPSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
MPS+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE +L E+HF+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+TYIKD+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVE IFFSGSFC+IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGL 205 HSP 2 Score: 30.0314 bits (66), Expect = 6.769e-100 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2
Query: 674 GSHCDFACLLYSL 712
G HCDFACLLY+L
Sbjct: 204 GLHCDFACLLYTL 216
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2B_ARATH (Putative ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 5.682e-99 Identity = 165/205 (80.49%), Postives = 189/205 (92.20%), Query Frame = 3
Query: 69 MPSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
MPS+PEEP+L P PDRFCMFPI+YPQIWEMYKKAEASFWTAEEVDLSQD R WE +LT DE+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSEMYSLLL+TYIKD+ E++ LF AIET+PCV KKA WA+ WI+GS++FAER++AFACVE IFFSGSFC+IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGL 205 HSP 2 Score: 30.4166 bits (67), Expect = 5.682e-99 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2
Query: 674 GSHCDFACLLYSL 712
G HCDFACL+YSL
Sbjct: 204 GLHCDFACLIYSL 216
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2) HSP 1 Score: 326.25 bits (835), Expect = 2.374e-91 Identity = 156/199 (78.39%), Postives = 174/199 (87.44%), Query Frame = 3
Query: 84 EEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
EEPLL RF MFPIRY IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVE IFFSGSFCAIFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 216 HSP 2 Score: 31.187 bits (69), Expect = 2.374e-91 Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2
Query: 674 GSHCDFACLLYSL 712
G HCDFACLLYSL
Sbjct: 215 GLHCDFACLLYSL 227
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 3.714e-86 Identity = 153/204 (75.00%), Postives = 172/204 (84.31%), Query Frame = 3
Query: 72 PSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
PSI EEPLL NP RF +FPI Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 269 HSP 2 Score: 25.7942 bits (55), Expect = 3.714e-86 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 268 GLHCDFACLMF 278
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_MESAU (Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus auratus GN=RRM2 PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 8.244e-86 Identity = 152/210 (72.38%), Postives = 175/210 (83.33%), Query Frame = 3
Query: 54 SALTKMPSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
S ++ PS+ +EPLL NP RF +FPI Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 60 SKVSTNPSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 269 HSP 2 Score: 25.7942 bits (55), Expect = 8.244e-86 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 268 GLHCDFACLMF 278
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus GN=Rrm2 PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 4.061e-85 Identity = 150/204 (73.53%), Postives = 171/204 (83.82%), Query Frame = 3
Query: 72 PSIPEEPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
PS+ +EPLL NP RF +FPI Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 269 HSP 2 Score: 25.7942 bits (55), Expect = 4.061e-85 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 268 GLHCDFACLMF 278
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_VACCA (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Ankara) GN=MVA032L PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.920e-85 Identity = 148/198 (74.75%), Postives = 168/198 (84.85%), Query Frame = 3
Query: 87 EPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
EP+LAPNP+RF +FPI+Y IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 199 HSP 2 Score: 25.7942 bits (55), Expect = 6.920e-85 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 198 GLHCDFACLMF 208
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_VACCW (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Western Reserve) GN=VACWR043 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 9.027e-85 Identity = 148/198 (74.75%), Postives = 168/198 (84.85%), Query Frame = 3
Query: 87 EPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
EP+LAPNP+RF +FPI+Y IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 199 HSP 2 Score: 25.7942 bits (55), Expect = 9.027e-85 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 198 GLHCDFACLMF 208
BLAST of FC921491 vs. ExPASy Swiss-Prot
Match: RIR2_VACCC (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Copenhagen) GN=F4L PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 9.027e-85 Identity = 148/198 (74.75%), Postives = 168/198 (84.85%), Query Frame = 3
Query: 87 EPLLAPNPDRFCMFPIRYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVERIFFSGSFCAIFWLKKRGLMPRITFSNELISRDEGL 680
EP+LAPNP+RF +FPI+Y IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VE IFFSGSF +IFWLKKRGLMP +TFSNELISRDEGL
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 199 HSP 2 Score: 25.7942 bits (55), Expect = 9.027e-85 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query: 674 GSHCDFACLLY 706
G HCDFACL++
Sbjct: 198 GLHCDFACLMF 208 The following BLAST results are available for this feature:
BLAST of FC921491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921491 ID=FC921491; Name=FC921491; organism=Citrus clementina; type=EST; length=712bpback to top |