FC921498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.083e-71 Identity = 140/208 (67.31%), Postives = 152/208 (73.08%), Query Frame = 1 Query: 70 MVGT-NSLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTSS-GAPMDDPDVWXXXXXXXXXXXXXXAGQVGMRISPQDGAWARGATNRTGTSSRGGKAAGPSRGNTGVRAXXXXXXXXXXXXXXXADSANGDSEDG 687 MVG+ NSL GLQDHLKLAREYALEG YDTS+IFFDGAIAQINKHLNTLDDPL R KWMNVKKA++EET+VVKQLDAERRAFKE P RR +SPPIN KSSFVFQPLDEYPTSS G PMDDPDVW AGQ G R SPQDGAWARG T RTG +SRGG+ S+ G R+ A+S NGD+EDG Sbjct: 1 MVGSSNSLAGLQDHLKLAREYALEGSYDTSVIFFDGAIAQINKHLNTLDDPLARTKWMNVKKAIMEETEVVKQLDAERRAFKEAPTGRRAASPPINTKSSFVFQPLDEYPTSSGGGPMDDPDVWRPPTRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGARS-STAGKKGAASKSNKAESMNGDAEDG 207
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + D+ K REYAL G YD+S++++ G I QI++H ++ DP ++ KW V++ LLEE + VK + + +FK PP ++P S P DP VW Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIHRHCQSVRDPAVKGKWQQVRQELLEEYEQVKSIVSTLESFK-------IDKPP-------------DFPVSYQDEPFRDPAVW 99
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVWXXXXXXXXXXXXXXAGQVGMRISP---QDGAWARGATNRTGTSSRGGKAA 576 +L + ++ K REYAL G YD+S++++ G I QI +H +L DP +AKW V++ LLEE + VK + + +FK PP ++P S P DP VW + + P GA ARG R S+ KAA Sbjct: 2 NLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELLEEYEQVKSIVSTLESFK-------MDKPP-------------DFPVSCRDEPFRDPAVWPPPVPAEHRAPPQIR-RPNREVRPLRKDMGAGARGLVGRAHQISKSDKAA 148
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + D+ K REYAL G YD+S++++ G I QI +H ++ DP ++ KW V++ LLEE + VK + + +FK PP ++P S P DP VW Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSIRDPAVKGKWQQVRQELLEEYEQVKSIVSTLESFK-------IEKPP-------------DFPVSCQDEPFRDPAVW 99
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + D+ K REYAL G YD+S++++ G I QI +H ++ DP ++ KW V++ LLEE + VK + + +FK PP ++P S P+ DP VW Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSVRDPAVKGKWQQVRQELLEEYEQVKSIVSTLESFK-------IDKPP-------------DFPVSCQDEPVRDPAVW 99
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + D+ K REYAL G YD+S++++ G I QI +H ++ DP I+ KW V++ LLEE + VK + + +FK PP ++P S P DP VW Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSVRDPAIKGKWQQVRQELLEEYEQVKSIVSTLESFK-------IDRPP-------------DFPVSCQDEPFRDPAVW 99
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + ++ K REYAL G YD+S++++ G I QI +H +L DP +AKW V++ LLEE + VK + + +FK PP ++P S P DP VW Sbjct: 2 NLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELLEEYEQVKSIVSTLESFK-------MDKPP-------------DFPVSCRDEPFRDPAVW 99
BLAST of FC921498 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 85 SLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRAKWMNVKKALLEETDVVKQLDAERRAFKEVPGSRRTSSPPINAKSSFVFQPLDEYPTS-SGAPMDDPDVW 435 +L + D+ K REYAL G YD+S++++ G + QI +H ++ DP I+ KW V++ LLEE + VK + + +FK PP ++P S P DP VW Sbjct: 2 NLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRDPAIKGKWQQVRQELLEEYEQVKSIVSTLESFK-------IDKPP-------------DFPVSCQDEPFRDPAVW 99 The following BLAST results are available for this feature:
BLAST of FC921498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921498 ID=FC921498; Name=FC921498; organism=Citrus clementina; type=EST; length=688bpback to top |