FC921499

Overview
NameFC921499
Unique NameFC921499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15308 contig Ccv1_Contig15308:123..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: NCASE_ARATH (Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.247e-86
Identity = 154/227 (67.84%), Postives = 183/227 (80.62%), Query Frame = 3
Query:    9 YPYEFESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTG--ESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYISE 683
            YP EFESTRIIGE+QF  AV+LFNKA+EKL+GKI Y+H+YLDFS L+V +PK  GGSETVKTC                    F QGDD+GN FWRLVR++L+ P  EQ+ CQ PKPILLDTGEMK+PYDWAPSILPIQIL++GQLVILSVPGEFTTMAGRRLRDA+K+ + ++   E ++N+HVV+AGLTN+YSQY+ TFEEY+VQRYEGASTLYG HTL+AYI E
Sbjct:  366 YPDEFESTRIIGEKQFKMAVELFNKATEKLQGKIGYQHAYLDFSNLDVTVPKAGGGSETVKTCPAAMGFGFAAGTTDGPGAFDFKQGDDQGNVFWRLVRNVLRTPGPEQVQCQKPKPILLDTGEMKEPYDWAPSILPIQILRIGQLVILSVPGEFTTMAGRRLRDAIKSFLISSDPKEFSNNMHVVIAGLTNTYSQYIATFEEYEVQRYEGASTLYGRHTLTAYIQE 592          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: NCSEB_DICDI (Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58
Identity = 110/223 (49.33%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDK--GNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYISE 683
            FEST+IIG  QF KA++LFN AS ++ G + YRHS++ F+ + V  P  N G +   TC                    F Q D+   GNPFW  + D + KP  +QI CQ PKPILLD G M +P  W P ++PIQI+ +GQ+V+++VPGEFTTM+GRRLR++V+ ++   GES  N  V++AGL+N+YS Y+ TFEEYQVQRYEGAST++GPHTL +Y+ E
Sbjct:  338 FESTQIIGGNQFNKALELFNNASIQVSGPVQYRHSWVQFTNVSVE-PPYNSGVDNATTCRGAMGYSFAAGTTDGPGAFNFVQSDNNTSGNPFWNFIGDFIAKPTPDQIRCQSPKPILLDVG-MVEPIPWVPDVMPIQIVTIGQIVLVAVPGEFTTMSGRRLRNSVREII---GESIENPIVLIAGLSNTYSGYIATFEEYQVQRYEGASTVFGPHTLGSYMQE 555          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: NCSEA_DICDI (Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.697e-54
Identity = 106/222 (47.75%), Postives = 145/222 (65.32%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKG-NPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYISE 683
            FEST+IIG  QF KA++LFN A+ ++ GKI YRH++  F+ + V  P  N G E   TC                    F QGD+   NPFW  +  ++ KP  +Q  CQ PKPIL+D G M +P  W P ++P+QI+ +GQ+V+++VPGEFTTM+GRRLR+ V+ ++   G+S  N  V++AGL N+YS Y+ TFEE+QVQRYEGAST++GPHTL AY  E
Sbjct:  333 FESTQIIGGNQFNKALELFNNATIQVSGKIQYRHTWKPFTNVSVEAP-YNSGVEGATTCRGAMGYSFAGGTTDGPGAFNFIQGDNSTTNPFWNFIGGIIAKPTPQQTACQAPKPILIDVG-MVEPIPWVPDVMPLQIITLGQIVLVAVPGEFTTMSGRRLRNTVREII---GQSIENPIVLIAGLANTYSGYIATFEEFQVQRYEGASTVFGPHTLGAYQQE 549          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: ASAH2_DANRE (Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.777e-48
Identity = 100/220 (45.45%), Postives = 135/220 (61.36%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYI 677
            FESTRIIGE  F  A +L+  A ++L G +   H +++ +   V    Q   + T +TC                    F QGD +G+PFW  +RD +L  P  E   C  PKPIL  TGEM  P  W P+I+ +QI+ +G L +++VPGEFTTM+GRR+R+AVK  +    E  +N  VV+AGL N Y+ Y+TT+EEYQ+QRYEGAST++GPHTLSAYI
Sbjct:  352 FESTRIIGENMFKIAKELYGSAKQELHGPVYGAHQWVNMTDETV----QFNSTHTGRTCKPALGHSFAAGTTDGGGEFNFLQGDTEGDPFWDGIRDAVLGPPSNETKACHQPKPILFSTGEMDSPLPWHPAIVDVQIITIGSLAVVAVPGEFTTMSGRRIREAVKRELEVK-EPFTNAEVVVAGLCNIYTHYITTYEEYQIQRYEGASTIFGPHTLSAYI 566          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: ASAH2_RAT (Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48
Identity = 103/220 (46.82%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYI 677
            FEST IIG   + KA +L   AS+++ G +   H +++ + + V    Q   + TVKTC                     TQG  +GN FW  +RD LL KP +E I CQ PKPIL+ TGE+ +P+ W P I+ IQI+ +G L I ++PGEFTTM+GRRLR+AVK      G    ++ VV+AGL+N Y+ Y+TT+EEYQ QRYE AST+YGPHTLSAYI
Sbjct:  375 FESTHIIGRVIYQKAKELHASASQEVTGPVLTAHQWVNMTDVSV----QLNATHTVKTCKAALGYSFAAGTIDGVSGLNITQGTTEGNLFWDTLRDQLLGKPSEEIIECQKPKPILIHTGELTKPHPWQPDIVDIQIVTLGSLAIAAIPGEFTTMSGRRLREAVKKEFALYG--MKDMTVVIAGLSNVYTHYITTYEEYQAQRYEAASTIYGPHTLSAYI 588          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: ASAH2_HUMAN (Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.152e-47
Identity = 96/220 (43.64%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYI 677
            F+ST+IIG   + +A +L+  AS+++ G +   H ++D + + V +      +   KTC                    FTQG  +G+PFW  +RD +L KP +E   C  PKPILL TGE+ +P+ W P I+ +QI+ +G L I ++PGEFTTM+GRRLR+AV+    + G    N+ VV++GL N Y+ Y+TT+EEYQ QRYE AST+YGPHTLSAYI
Sbjct:  394 FDSTQIIGRAMYQRAKELYASASQEVTGPLASAHQWVDMTDVTVWL----NSTHASKTCKPALGYSFAAGTIDGVGGLNFTQGKTEGDPFWDTIRDQILGKPSEEIKECHKPKPILLHTGELSKPHPWHPDIVDVQIITLGSLAITAIPGEFTTMSGRRLREAVQAEFASHG--MQNMTVVISGLCNVYTHYITTYEEYQAQRYEAASTIYGPHTLSAYI 607          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: ASA2C_HUMAN (Putative neutral ceramidase C OS=Homo sapiens GN=ASAH2C PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.152e-47
Identity = 96/220 (43.64%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYI 677
            F+ST+IIG   + +A +L+  AS+++ G +   H ++D + + V +      +   KTC                    FTQG  +G+PFW  +RD +L KP +E   C  PKPILL TGE+ +P+ W P I+ +QI+ +G L I ++PGEFTTM+GRRLR+AV+    + G    N+ VV++GL N Y+ Y+TT+EEYQ QRYE AST+YGPHTLSAYI
Sbjct:  236 FDSTQIIGRAMYQRAKELYASASQEVTGPLASAHQWVDMTDVTVWL----NSTHASKTCKPALGYSFAAGTIDGVGGLNFTQGKTEGDPFWDTIRDQILGKPSEEIKECHKPKPILLHTGELSKPHPWHPDIVDVQIITLGSLAITAIPGEFTTMSGRRLREAVQAEFASHG--MQNMTVVISGLCNVYTHYITTYEEYQAQRYEAASTIYGPHTLSAYI 449          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: ASAH2_MOUSE (Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.965e-47
Identity = 99/220 (45.00%), Postives = 136/220 (61.82%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVAIPKQNGGSETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRD-LLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYI 677
            FEST IIG   + KA +L+  AS+++ G +   H +++ + + V    Q   + TVKTC                     TQG  +G+PFW  +RD LL KP +E + CQ PKPILL +GE+  P+ W P I+ +QI+ VG L I ++PGE TTM+GRR R+A+K      G    ++ VV+AGL+N Y+ Y+TT+EEYQ QRYE AST+YGPHTLSAYI
Sbjct:  370 FESTHIIGRIIYQKAKELYASASQEVTGPVLAAHQWVNMTDVSV----QLNATHTVKTCKPALGYSFAAGTIDGVSGLNITQGTTEGDPFWDTLRDQLLGKPSEEIVECQKPKPILLHSGELTIPHPWQPDIVDVQIVTVGSLAIAAIPGELTTMSGRRFREAIKKEFALYG--MKDMTVVIAGLSNVYTHYITTYEEYQAQRYEAASTIYGPHTLSAYI 583          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: NCASE_DROME (Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 89/236 (37.71%), Postives = 127/236 (53.81%), Query Frame = 3
Query:   21 FESTRIIGERQFTKAVDLFNKASEK-----LEGKIDYRHSYLDFSQLEVAIPKQNGGS--------ETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYISESE 689
            FEST+I+G+R    A+ L N+ S++     + G + + H ++D       +P  NG +        + ++ C                    F QG    NP W  VRD +  P +E I C  PKPILL TG    PY+W P I+  Q+L++G ++I +VP EFTTMAGRRLR+ ++   +  G    +  V++AGLTN Y+ Y  T EEYQ QRYE AST++GPHT S Y+   E
Sbjct:  315 FESTQILGQRLADAALGLLNEQSQESTAREVTGDVRFIHQFVD-------MPNYNGSTYNPLSRKVDKIRGCQPAMGYSFAAGTTDGPGAFSFEQGTTTDNPMWNFVRDFIAAPTQEDIKCHEPKPILLATGRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAVG--GIDTEVIIAGLTNIYTSYTVTPEEYQAQRYEAASTIFGPHTHSIYMDVFE 541          
BLAST of FC921499 vs. ExPASy Swiss-Prot
Match: NCASE_DROPS (Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39
Identity = 88/235 (37.45%), Postives = 126/235 (53.62%), Query Frame = 3
Query:   24 ESTRIIGERQFTKAVDLFNKASEK-----LEGKIDYRHSYLDFSQLEVAIPKQNGGS--------ETVKTCXXXXXXXXXXXXXXXXXXXXFTQGDDKGNPFWRLVRDLLKKPDKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYISESE 689
            EST+I+G+R    A+ L N+ S++     + G + + H ++D       +P  NG +        + ++ C                    F QG    NP W  VRD +  P +E I C  PKPILL TG    PY+W P I+  Q+L++G ++I +VP EFTTMAGRRLR+ ++   +  G    +  V++AGLTN Y+ Y  T EEYQ QRYE AST++GPHT S Y+   E
Sbjct:  316 ESTQILGQRLADAALGLLNEQSQESTAREVTGDVRFIHQFVD-------MPNYNGSAYNPLSRKIDKIRGCQPAMGYSFAAGTTDGPGAFSFEQGTTTDNPMWNFVRDFIATPTQEDIKCHEPKPILLATGRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAAG--GLDTEVIIAGLTNIYTSYTVTPEEYQAQRYEAASTIFGPHTHSIYMDVFE 541          
The following BLAST results are available for this feature:
BLAST of FC921499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NCASE_ARATH6.247e-8667.84Neutral ceramidase OS=Arabidopsis thaliana GN=At2g... [more]
NCSEB_DICDI9.400e-5849.33Neutral ceramidase B OS=Dictyostelium discoideum G... [more]
NCSEA_DICDI3.697e-5447.75Neutral ceramidase A OS=Dictyostelium discoideum G... [more]
ASAH2_DANRE1.777e-4845.45Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV... [more]
ASAH2_RAT3.031e-4846.82Neutral ceramidase OS=Rattus norvegicus GN=Asah2 P... [more]
ASAH2_HUMAN1.152e-4743.64Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 S... [more]
ASA2C_HUMAN1.152e-4743.64Putative neutral ceramidase C OS=Homo sapiens GN=A... [more]
ASAH2_MOUSE1.965e-4745.00Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 S... [more]
NCASE_DROME3.038e-4037.71Neutral ceramidase OS=Drosophila melanogaster GN=C... [more]
NCASE_DROPS1.508e-3937.45Neutral ceramidase OS=Drosophila pseudoobscura pse... [more]

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Properties
Property NameValue
Genbank descriptionC32105F09EF RVDevelopN Citrus clementina cDNA clone C32105F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921499 ID=FC921499; Name=FC921499; organism=Citrus clementina; type=EST; length=714bp
ACCTGTCCTACCCATACGAATTTGAAAGTACACGTATTATTGGAGAGAGG
CAATTTACAAAAGCTGTAGATCTTTTCAATAAAGCATCCGAAAAATTAGA
AGGAAAGATTGACTATCGTCACAGTTATCTGGACTTCTCCCAGCTTGAGG
TGGCAATTCCTAAACAAAATGGAGGATCAGAGACAGTAAAAACATGTCCT
GCTGCTATGGGGTTTGCATTTGCTGCAGGAACAACTGATGGACCAGGAGC
ATTTGATTTTACCCAAGGAGATGACAAGGGCAATCCTTTTTGGAGGCTGG
TACGCGACTTACTTAAAAAACCAGATAAGGAACAAATTAATTGTCAGTAC
CCAAAGCCCATCTTACTCGATACTGGTGAAATGAAGCAACCATACGACTG
GGCACCTTCAATACTTCCAATTCAGATCCTCCAAGTAGGGCAGCTAGTCA
TTCTTAGTGTACCTGGAGAGTTTACGACAATGGCTGGGAGGCGACTTCGT
GATGCTGTGAAGACGGTGGTCACTACTACTGGTGAATCCAATAGCAATGT
TCATGTTGTTTTAGCTGGCTTGACTAATTCCTATTCACAGTATGTGACTA
CCTTCGAAGAGTACCAGGTGCAGAGATACGAGGGTGCCTCCACACTTTAT
GGTCCACACACGCTCAGTGCCTACATTTCAGAGTCAGAAGCTTGCAGTGC
TCTCTCAGTGGCCA
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