FC921500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_MOUSE (UPF0454 protein C12orf49 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.850e-15 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 136 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPAR-TLKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHGNAY 462 C+ +VQG++LL+D+ GYVC+ + CC +++ C GC L + CC +YEYCVSCC+ P++ L E+ LN +A F+ C +CR +S+SV H N Y Sbjct: 75 CRNSVQGKHLLTDELGYVCERKDLLANG-CCDVSVPSTKQYCCDGC-LANGCCEAYEYCVSCCLQPSKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_BOVIN (UPF0454 protein C12orf49 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14 Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 136 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEK---GEKFSCQGCNLLSQCCNSYEYCVSCCVNP-ARTLKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHGNAY 462 C+ ++QG++L++D+ GYVC+ + CC +++ C GC L S CC++YEYCVSCC+ P + L E+ LN +A F+ C +CR +S+SV H N Y Sbjct: 75 CRNSIQGKHLITDELGYVCERRDLLVNG-CCNVNVPGTKQYCCDGC-LSSGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_XENLA (UPF0454 protein C12orf49 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 91 NISHQERFGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHGNAYLSDF-HHCF 486 N+ + R Q C+ +VQG+ L++DD GY+C+ + CC + +SC+ C L + CC+ YE+CVSCC+ P + L+ E+ LN +A F+ C +CR +S+SV H N Y + HC+ Sbjct: 64 NLGNSSRISNQ----CRNSVQGKLLVTDDMGYICERKELLANG-CCNINVASTKLYSCETC-LPNGCCSVYEFCVSCCLQPNKQLQLERFLNKAAVAFQNLFQAVEDHFELCLAKCRTSSQSVQHENTYRNPIAKHCY 195
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_HUMAN (UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf49 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 136 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCVSCCVNP-ARTLKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHGNAY 462 C+ ++QG++L++D+ GYVC+ + CC +++ C GC + CC++YEYCVSCC+ P + L E+ LN +A F+ C +CR +S+SV H N Y Sbjct: 75 CRNSIQGKHLITDELGYVCERKDLLVNG-CCNVNVPSTKQYCCDGC-WPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_CHICK (UPF0454 protein C12orf49 homolog OS=Gallus gallus GN=RCJMB04_18o22 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 136 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHGNAY 462 C+ +VQG+ L++D+ GY+C+ + CC + +SC C L + CC+ YEYCVSCC+ P++ L E+ LN +A F+ C +CR +S+SV H N Y Sbjct: 75 CRNSVQGKLLITDELGYICERKDLLVNG-CCNVNVPSTKLYSCDSC-LPNGCCSVYEYCVSCCLQPSKQHLLERFLNRAAMAFQNLFMAVEDRFELCLAKCRTSSQSVQHENTY 186
BLAST of FC921500 vs. ExPASy Swiss-Prot
Match: CL049_DANRE (UPF0454 protein C12orf49 homolog OS=Danio rerio GN=zgc:110063 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 136 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC---PEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNP-ARTLKEQVLNVKIAKPTTAGTYGSV---FDFCAGRCRHNSESVVHGNAY 462 C+ ++QG+ LL+D+ GYVC+ + CC ++ C+ C L + CC+ YEYCVSCC+ P + L E+ LN A + +V F+ C +CR +S+SV H N Y Sbjct: 69 CRNSIQGKSLLTDELGYVCERKDLLVNG-CCNVNAPSSSQYVCKSC-LSNGCCSIYEYCVSCCLQPDKQPLLERFLN--RAAEGFQNLFTAVEDHFELCLAKCRTSSQSVQHENTY 180 The following BLAST results are available for this feature:
BLAST of FC921500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921500 ID=FC921500; Name=FC921500; organism=Citrus clementina; type=EST; length=764bpback to top |