FC921504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: WDTC1_MOUSE (WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 374 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE++VNC+Q H C +ATSGID +R Sbjct: 521 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVR 605
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: WDTC1_HUMAN (WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 374 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE++VNC+Q H C +ATSGID +R Sbjct: 521 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVR 605
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: YBU3_SCHPO (Uncharacterized WD repeat-containing protein C609.03 OS=Schizosaccharomyces pombe GN=SPBC609.03 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 401 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 Y GHCNV + IK +F GQ +Y+ SGSDDGR+FIW+K ++ ++ GD VN ++ H +A SGIDST++ Sbjct: 664 YYGHCNVES-IKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDSEAVNVIEGHPRCPTLAVSGIDSTVK 738
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: DCAF6_PONAB (DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 389 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 +K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC+Q H FD ++A+SGID I+ Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIK 786
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: DCAF6_MOUSE (DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 389 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 +K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC+Q H FD ++A+SGID I+ Sbjct: 725 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIK 802
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: DCAF6_HUMAN (DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 389 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHLFDCVVATSGIDSTIR 628 +K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC+Q H FD ++A+SGID I+ Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIK 786
BLAST of FC921504 vs. ExPASy Swiss-Prot
Match: DC8L1_HUMAN (DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens GN=DCAF8L1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 395 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCVQCHLFDCVVATSGIDSTIR 628 +RY GH N T IK +F G R +++ SGSD G F WEK + ++I+ + GD +VNC++ H + V+ATSG+D +R Sbjct: 429 KRYKGHRNNDT-IKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVR 506 The following BLAST results are available for this feature:
BLAST of FC921504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921504 ID=FC921504; Name=FC921504; organism=Citrus clementina; type=EST; length=665bpback to top |