FC921587

Overview
NameFC921587
Unique NameFC921587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 3
Query:   66 VDPAFIQPPEFRPKVQNNMEIDDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVK-RDEVH----PMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKL 542
            V  +FI P   + + + ++ + +++P+IDL      LV ++  ACQ +G FQVINHG P EL     +  KEFF  P EEK+K K + E      P+    + + +  +   E F +W      L     P D++   L N WPE P  +RE+   Y+ EV KL
Sbjct:   13 VSESFIAP--LQKRAEKDVPVGNDVPIIDLQQHHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDT---LAHGCHPLDQD---LVNSWPEKPAKYREVVAKYSVEVRKL 168          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.273e-15
Identity = 49/167 (29.34%), Postives = 87/167 (52.10%), Query Frame = 3
Query:   66 VDPAFIQPPEFRPKVQNNMEIDDEIPVIDL-----STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKV--KRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            V P +++  + + +V ++ ++  EIP+ID+     ST     V ++  AC++WGFFQ++NHG  S    +++   ++FF  P+EEK+K   + DE+   G           DW ++F   +Q              ELR+  + +P+ PL FR+  E Y+ EV+ +A
Sbjct:   29 VPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQ------------PVELRK-PHLFPKLPLPFRDTLEMYSSEVQSVA 182          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14
Identity = 50/164 (30.49%), Postives = 83/164 (50.61%), Query Frame = 3
Query:   78 FIQPPEFRPKVQNNMEIDDEIPVIDLS----TDPK--QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            F++  + RPKV  N E  DEIPVI L+     D K  ++  E+  AC+ WG FQV++HG  + L A + + A++FF  P EEK +         G+    H +   V+DW+E+  ++                   R  ++WP+ P G+ ++ E+Y+ ++  LA
Sbjct:   18 FVRDEDERPKVAYN-EFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVR-------------NRDYSRWPDKPQGWAKVTEEYSEKLMGLA 167          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14
Identity = 52/180 (28.89%), Postives = 92/180 (51.11%), Query Frame = 3
Query:   30 QKYNLLVSIMGD--VDPAFIQPPEFRPKVQNNMEIDDEIPVIDLS----TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            +K   L S+ GD  ++  F++  + RPKV  N E  ++IPVI L+        ++  ++  AC+ WG FQV++HG   +L A + + A+EFF  P EEK +         G+    H +   V+DW+E+  ++         S   + ++  R    WP+ P G+ ++ E+Y+ ++  LA
Sbjct:    4 EKPKTLTSLEGDDKLNSNFVRDEDERPKVAYN-EFSNDIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYF---------SYPTNSRDYTR----WPDKPEGWIKVTEEYSNKLMTLA 169          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14
Identity = 52/179 (29.05%), Postives = 89/179 (49.72%), Query Frame = 3
Query:   45 LVSIMGD--VDPAFIQPPEFRPKVQNNMEIDDEIPVIDLSTDPKQLVLEVGHACQK-------WGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELR-RLTNQWPEYPLGFRELCEDYAREVEKLA 545
            L ++ G+  +  +F++  + RPKV  N +  +EIPVI L+ +  +L   V   C+K       WG FQV+NHG  S L + + + A+EFF  P EE  +         G+    H +   V+DW+E+  ++                 LR R  ++WP+ P G+R + ++Y+ ++  LA
Sbjct:    6 LTALAGEKTLQSSFVRDEDERPKVAYN-DFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYF--------------SYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLA 169          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 51/168 (30.36%), Postives = 84/168 (50.00%), Query Frame = 3
Query:   78 FIQPPEFRPKVQNNMEIDDEIPVIDL------STDPK-QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEV---FDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            F++  + RPK+  N +  DEIPVI L      S D + Q+  ++  AC+ WG FQV++HG   +L + + + A++FF  P EEK +         G+    H +   V+DW+E+   F + +Q                 R  ++WP+ P G+R + E Y+ E+  LA
Sbjct:   19 FVRDEDERPKIAYN-KFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQ----------------ARDYSRWPDKPEGWRSITEMYSDELMALA 169          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.935e-13
Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 3
Query:  135 EIPVIDLSTDPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            ++PV+DLS   ++LV   V  A + WG FQV+NHG P+EL  R++K  +EFF  P  EK+   R+     GY  +    +++  K +      D  +L   P P     R     WP+ P  +RE+ E+YAR V+ L+
Sbjct:    1 QVPVVDLSCPDEELVARTVVKASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGY-GRRIELDIKKRKGIV-----DQIYLSTWP-PSSVNYR----YWPKSPPDYREVNEEYARHVKTLS 127          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.935e-13
Identity = 46/174 (26.44%), Postives = 84/174 (48.28%), Query Frame = 3
Query:   30 QKYNLLVSIMGDVDPAFIQPPEFRPKVQNNMEIDDEIPVIDLS-TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVE 536
            Q+   L  ++  +   +I+    +P +     +  E+PVIDLS +D K++V  V  A ++WG FQV+NHG P+E+  ++++  K FF  P EEK+ + + E    +   G   Q+     + W +     +  P+ +                 WP+ P  +RE  E+YA+ ++
Sbjct:    7 QEIASLSKVIDTIPAEYIRSENEQPVISTVHGVVLEVPVIDLSDSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQ-------------FWPKNPPAYREANEEYAKRLQ 167          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.935e-13
Identity = 47/164 (28.66%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   78 FIQPPEFRPKVQNNMEIDDEIPVIDLS----TDPK--QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            F++  + RPKV  N+   DEIPVI L+     D K  ++  ++  AC+ WG FQV++HG  + L A + + A++FF  P E+K +         G+    H +   V+DW+E+  ++                   R  ++WP+ P G+ ++ E+Y+  +  LA
Sbjct:   19 FVRDEDERPKVAYNV-FSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVR-------------NRDYSRWPDKPEGWVKVTEEYSERLMSLA 168          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.446e-13
Identity = 49/180 (27.22%), Postives = 84/180 (46.67%), Query Frame = 3
Query:   30 QKYNLLVSIMGDVDPAFIQPPEFRPKVQNNMEIDDEIPVIDLST---DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQ-PIEEKQKVKR----DEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            Q  + +   M  +   +I+    +P       +  E+PVID+S    D ++LV E+  A ++WG FQVINHG P E+   ++K  KEFF + P EEK+ + +      +   G   Q+  +  + W +     +  P+ +                 WP+ P  +RE  E+YA+ + K+A
Sbjct:   21 QAISSITKCMDTIPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAIN-------------YRYWPKNPPSYREANEEYAKWLRKVA 187          
The following BLAST results are available for this feature:
BLAST of FC921587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
HY6H_HYONI2.141e-1633.54Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
SRG1_ARATH5.273e-1529.34Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FL3H_MATIN2.004e-1430.49Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_DIACA3.418e-1428.89Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_VITVI4.464e-1429.05Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_PETCR1.696e-1330.36Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FLS_MATIN4.935e-1334.78Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FLS_EUSGR4.935e-1326.44Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FL3H_ARATH4.935e-1328.66Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS_SOLTU6.446e-1327.22Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]

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Properties
Property NameValue
Genbank descriptionC32107A10EF RVDevelopN Citrus clementina cDNA clone C32107A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921587 ID=FC921587; Name=FC921587; organism=Citrus clementina; type=EST; length=592bp
GGAAGTTCTCCCACATACACAATCACAAACAGAAATATAATCTGCTGGTT
TCAATCATGGGAGATGTTGATCCAGCCTTCATTCAACCCCCTGAATTCAG
ACCAAAGGTTCAAAACAACATGGAAATAGATGATGAAATCCCAGTTATTG
ATCTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGT
CAAAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATT
AAAGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGGTCAACCAATAG
AGGAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCAT
GACCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTT
TTGGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATA
AGGAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTT
AGGGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAG
TTACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGAT
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