FC921622

Overview
NameFC921622
Unique NameFC921622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.317e-97
Identity = 172/210 (81.90%), Postives = 191/210 (90.95%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG-ADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG---SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            IDD+V+NLTSANVIGTGSSGVVYR+TIP+GE+LAVKKMWS +ESGAF+SEI+TLGSIRH+NIVRLLGW SN+NLKLLFYDYLPNGSLSS LHGAGKGG  DWEARY+VVLGVAHALAYLHHDC+P I+HGDVKAMNVLLGP ++ YLADFGLAR +SG   +G D    TN RP +AGSYGYMAPEHASMQRITEKSDVYS+GVVLLEVL
Sbjct:  753 IDDIVKNLTSANVIGTGSSGVVYRITIPSGESLAVKKMWSKEESGAFNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTN-RPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVL 961          

HSP 2 Score: 31.9574 bits (71), Expect = 5.317e-97
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  623 KASVGPTLPGGAPLVQMGRDHLASKE 700
            K  + P LPGGA LV+  RDHLA K+
Sbjct:  964 KHPLDPDLPGGAHLVKWVRDHLAEKK 989          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.973e-62
Identity = 116/217 (53.46%), Postives = 151/217 (69.59%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-----------AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            +D ++R L   NVIG G SGVVYR  + NGE +AVKK+W +  +G           +FS+E++TLG+IRHKNIVR LG   N+N +LL YDY+PNGSL SLLH       DW+ RY ++LG A  LAYLHHDC+PPI+H D+KA N+L+G  ++ Y+ADFGLA++V       CS T     +AGSYGY+APE+    +ITEKSDVYS+GVV+LEVL
Sbjct:  779 VDQIIRCLVEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNT-----VAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVL 990          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.941e-59
Identity = 115/219 (52.51%), Postives = 150/219 (68.49%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMW------------SSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            ++ V++ L   NVIG G SG+VY+  +PN E +AVKK+W            SS    +FS+E++TLGSIRHKNIVR LG   NKN +LL YDY+ NGSL SLLH  +G     WE RY+++LG A  LAYLHHDC+PPI+H D+KA N+L+GP ++ Y+ DFGLA++V        S T     +AGSYGY+APE+    +ITEKSDVYS+GVV+LEVL
Sbjct:  778 VEHVLKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNT-----IAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVL 991          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.147e-58
Identity = 112/214 (52.34%), Postives = 153/214 (71.50%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESG--------AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            ++++V +LT  NVIG G SG+VY+  IPNG+ +AVKK+W + ++         +F++EIQ LG+IRH+NIV+LLG+ SNK++KLL Y+Y PNG+L  LL G      DWE RY++ +G A  LAYLHHDC+P ILH DVK  N+LL   Y+A LADFGLA+++  S + +    N   ++AGSYGY+APE+     ITEKSDVYS+GVVLLE+L
Sbjct:  765 VNNIVTSLTDENVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQG--NRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYH----NAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEIL 972          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 3.572e-52
Identity = 101/208 (48.56%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    4 DDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            +DV+  L   N+IG G +G+VYR ++PN   +A+K++    +      F++EIQTLG IRH++IVRLLG+ +NK+  LL Y+Y+PNGSL  LLHG+  G   WE R+ V +  A  L YLHHDC P ILH DVK+ N+LL   ++A++ADFGLA+ +       C  +     +AGSYGY+APE+A   ++ EKSDVYSFGVVLLE++
Sbjct:  686 EDVLECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSS-----IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELI 888          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49
Identity = 98/217 (45.16%), Postives = 147/217 (67.74%), Query Frame = 1
Query:    4 DDVVRNLTSA-NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFS-------SEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK---GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            DDVV  L+   N++G GS+G VY+  +PNGE +AVKK+W  + E+G          +E+  LG++RH+NIVRLLG  +N++  +L Y+Y+PNGSL  LLHG  K     A+W A Y++ +GVA  + YLHHDC P I+H D+K  N+LL   ++A +ADFG+A+++    D++ S       +AGSYGY+APE+A   ++ +KSD+YS+GV+LLE++
Sbjct:  712 DDVVECLSKTDNILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLI--QTDESMS------VVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEII 920          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49
Identity = 99/221 (44.80%), Postives = 144/221 (65.16%), Query Frame = 1
Query:    7 DVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD--ESG---------------AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            +++ +L   NVIG G+SG VY+V + NGET+AVK++W+    E+G               AF +E++TLG IRHKNIV+L    S ++ KLL Y+Y+PNGSL  LLH +  G   W+ R++++L  A  L+YLHHD +PPI+H D+K+ N+L+   Y A +ADFG+A+ V  +G            +AGS GY+APE+A   R+ EKSD+YSFGVV+LE++
Sbjct:  671 EILESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTG----KAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIV 887          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.106e-48
Identity = 105/214 (49.07%), Postives = 140/214 (65.42%), Query Frame = 1
Query:   22 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESG------------AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ-LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            L   NVIG GSSG VY+V +  GE +AVKK+  S + G             F++E++TLG+IRHK+IVRL    S+ + KLL Y+Y+PNGSL+ +LHG  KGG    W  R  + L  A  L+YLHHDC+PPI+H DVK+ N+LL   Y A +ADFG+A++   SG    SKT +    +AGS GY+APE+    R+ EKSD+YSFGVVLLE++
Sbjct:  683 LDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSG----SKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELV 892          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 1
Query:    4 DDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWS-----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA----DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            +D+   LT  N+IG+G SG+VYRV + +G+TLAVKK+W      ++    F SE++TLG +RH NIV+LL   + +  + L Y+++ NGSL  +LH   +  A    DW  R+ + +G A  L+YLHHD +PPI+H DVK+ N+LL    +  +ADFGLA+ +    +D  S  +    +AGSYGY+APE+    ++ EKSDVYSFGVVLLE++
Sbjct:  680 EDIYPQLTEDNIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSM-SCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELI 892          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.649e-47
Identity = 98/215 (45.58%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKK-MWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLLFYDYLPNGSLSSLLHG----AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            I +    L    +IG+G SG VY+  + NGET+AVKK +W  D   + +F+ E++TLG+IRH+++V+L+G+ S+K   L LL Y+Y+ NGS+   LH       K    WE R ++ LG+A  + YLH+DC+PPI+H D+K+ NVLL    +A+L DFGLA+I++G+ D N   T      AGSYGY+APE+A   + TEKSDVYS G+VL+E++
Sbjct:  941 IMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTN---TESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152          
The following BLAST results are available for this feature:
BLAST of FC921622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4265_ARATH5.317e-9781.90Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH4.973e-6253.46Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RCH1_ARATH3.941e-5952.51LRR receptor-like serine/threonine-protein kinase ... [more]
Y1341_ARATH1.147e-5852.34Probable LRR receptor-like serine/threonine-protei... [more]
CLV1_ARATH3.572e-5248.56Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5148_ARATH1.659e-4945.16Probable leucine-rich repeat receptor-like protein... [more]
HSL1_ARATH1.659e-4944.80Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RLK5_ARATH9.106e-4849.07Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
HSL2_ARATH1.553e-4744.39LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH2.649e-4745.58LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC32107D11EF RVDevelopN Citrus clementina cDNA clone C32107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921622 ID=FC921622; Name=FC921622; organism=Citrus clementina; type=EST; length=723bp
ATTGATGACGTTGTCAGGAATCTAACGTCAGCTAATGTGATTGGCACTGG
AAGCTCCGGAGTTGTGTATAGAGTGACAATCCCAAATGGAGAAACACTAG
CAGTGAAGAAGATGTGGTCATCAGATGAGTCTGGTGCATTCAGCTCTGAA
ATTCAGACGCTAGGTTCAATCAGACACAAGAACATTGTGAGGCTTTTAGG
TTGGGGTTCTAACAAGAACCTGAAGCTTCTCTTCTATGATTACCTCCCCA
ATGGAAGCTTGAGCTCACTGCTGCATGGAGCAGGCAAAGGAGGAGCAGAT
TGGGAGGCTAGATATGAAGTTGTATTGGGGGTAGCTCATGCGCTTGCGTA
CTTGCATCATGATTGCATGCCTCCAATTTTGCATGGAGATGTCAAAGCAA
TGAATGTTTTGTTAGGCCCTGGATATCAAGCTTATCTTGCAGACTTTGGA
TTAGCTAGAATAGTCAGTGGCAGCGGAGACGATAATTGCTCCAAAACAAA
TCAAAGGCCTCAATTAGCTGGTTCTTATGGTTACATGGCTCCAGAACATG
CATCAATGCAGCGGATCACTGAGAAAAGTGATGTGTACAGTTTTGGTGTG
GTTCTTTTAGAGGTTTTACAGGAAGGCATCCGTTGGACCCACATTGCCAG
GTGGTGCACCTTTGGTTCAAATGGGTAGGGACCATTTAGCCAGCAAAGAG
ACCCTCTGATGTCTTGATGCTAA
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