FC921626

Overview
NameFC921626
Unique NameFC921626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length597
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14542 contig Ccv1_Contig14542:78..674. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.615e-94
Identity = 170/203 (83.74%), Postives = 184/203 (90.64%), Query Frame = 2
Query:    2 CMGMSAFYGPPKPESDMIALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKGGYRGRVELATKFGI-----RYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPLGREFLSSGPKLV 595
            CMGMSAFYGPPKPE DMI LIHHAI+SGITLLDTSD YGPHTNEILLGKALKGG R RV LATKFGI     +  +G+ +  GDPAYVRA CEASLKRLD+DCIDLYYQHR+DT+VPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSL +RDVEEEI+PTCRELGIGIVAYSPLGR FLSSGPKL+
Sbjct:   27 CMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLL 229          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 9.308e-92
Identity = 162/198 (81.82%), Postives = 176/198 (88.89%), Query Frame = 2
Query:    2 CMGMSAFYGPPKPESDMIALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKGGYRGRVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPLGREFLSSGPKLV 595
            CMGMSAFYGPPKPES+MI LIHHA+D+G+T LDTSD YGPHTNE+LLGKAL+GG R +VELATKFG+ + DG+    GDPAYVR  CE S KRL VDCIDLYYQHRID +VPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSL +RD EE+I+PTCRELGIGIVAYSPLGR F SSG KLV
Sbjct:   27 CMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLV 224          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 98/202 (48.51%), Postives = 128/202 (63.37%), Query Frame = 2
Query:    2 CMGMSAFYGPPKPESDMIALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKG-GYRGRVELATKFGIRY--EDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEE---IVPTCRELGIGIVAYSPLGREFLSSGPK 589
            CMG+ A YGP   E++  A++ HA D G T  D+SD YG   NE  +G+  K  G R  + LATKFG     E G+ S   +P Y+    + SLKRL +DCIDLYY HR   + PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S  + ++E     ++  CRE  I IV Y+PLGR FL+   K
Sbjct:   20 CMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYK 220          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.729e-24
Identity = 64/174 (36.78%), Postives = 94/174 (54.02%), Query Frame = 2
Query:   59 LIHHAIDSGITLLDTSDSYGPHTNEILLGKALKG-GYRGRVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPLGREFLS 577
            L+  A+D G+  +DT+  YG   +E L+G+ ++  G R  + +ATK   +  DG         ++R+  E SLKRL  D IDLYY H  D K P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E+E++P C + GI  + Y PL    L+
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLT 214          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 2
Query:   41 ESDMIALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKG-GYRGRVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPLGREFLS 577
            E   I  I  A+D GITL+DT+ +YG   +E ++GKA+K  G R +V LATK  + +++ Q     + A +    E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L  R++EE ++P  ++  I  + Y  L R  L+
Sbjct:   33 EKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLT 212          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.046e-22
Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 2
Query:    8 GMSAFYGPPK--PESDMIALIHHAIDSGITLLDTSDSYG---PHTNEILLGKALKG--GYRGRVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRL-DVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEE-IVPTCRELGIGIVAYSPLGREFLSSGPKLV 595
            G+      PK  P+ +   ++++A+  G    D  + YG   P +N  LL +  +       +V L+ K G+ ++       G+P +V  + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL +RD+E   I+  CR+L I I+AYSP  R  L+   K V
Sbjct:   15 GLMGLTWKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTV 217          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 2
Query:   32 PKPESDMIALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKGGYRGRVELATKFG-IRYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPL 559
            PK +   IA +    +  I  +DT+DSYGP  +E LL +AL   Y+G + +ATK G +R    ++  CG P ++R     S++RL V  IDL+  HRID KVP +    E+  + +EG I+++GLSE +   I+ A    P+ +VQ  ++L  R   E+++  C + GI  + + PL
Sbjct:   44 PKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREALYP-YKGLI-IATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRK-NEKVLEYCEQKGIAFIPWYPL 217          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.501e-20
Identity = 54/167 (32.34%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   59 LIHHAIDSGITLLDTSDSYGPHTNEILLGKALKGGYRGRVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRLDVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPL 559
            L+  AI +G+T+LDT+  YG   +E L+G+ L+   R  V +ATK   R +   + +   P +++ + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L  R+ E+   P  +E  I  + Y PL
Sbjct:   40 LVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPL 206          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 2
Query:    5 MGMSAFYGPPK--PESDMIALIHHAIDSGITLLDTSDSYG---PHTNEILLGKALKGGYRG--RVELATKFGIRYEDGQYSYCGDPAYVRATCEASLKRL-DVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEE-IVPTCRELGIGIVAYSPLGREFLSSGPK 589
            +G+      PK  P      L+++A+  G    +  + YG   P  N  LL    +   +   +V L+ K G  ++    +  GDP  V  + + +L RL     +DL+   R+D KVPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL +RD+E+  I+ TC +L I I+AY+P     L+   K
Sbjct:   14 LGLMGLTWRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVK 215          
BLAST of FC921626 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19
Identity = 69/209 (33.01%), Postives = 103/209 (49.28%), Query Frame = 2
Query:    5 MGMSAFYGPPKPESDM-----IALIHHAIDSGITLLDTSDSYGPHTNEILLGKALKGGYRGRVELATKFGIRYE--DGQYSYCGD--------PAYVRATCEASLKRLDVDCIDLYYQHRIDTK---VPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLCTRDVEEEIVPTCRELGIGIVAYSPLGREFLS 577
            +G  A  G P    D+     I  I  A   GI L+DT+  Y    +E+++G+ALK   R +V + TK GI +E     ++  GD        P  +R    ASL+RL +D ID+Y  H         PI  T+  L +L  EGKI+ IG +   A  IR       +  +Q ++S+  R +E E++P CR+ GI +  YSPL +  L+
Sbjct:   18 LGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLT 226          
The following BLAST results are available for this feature:
BLAST of FC921626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
A115_TOBAC7.615e-9483.74Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE9.308e-9281.82IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO3.587e-4348.51Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU3.729e-2436.78Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
GS69_BACSU4.123e-2337.78General stress protein 69 OS=Bacillus subtilis GN=... [more]
PLR1_SCHPO2.046e-2236.10Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YH5B_SCHPO2.672e-2235.59Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
IOLS_BACSU2.501e-2032.34Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
PLR2_SCHPO2.117e-1934.80Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
YDJG_ECOLI3.612e-1933.01Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionC32107E03EF RVDevelopN Citrus clementina cDNA clone C32107E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921626 ID=FC921626; Name=FC921626; organism=Citrus clementina; type=EST; length=597bp
ATGCATGGGCATGTCCGCCTTCTACGGGCCCCCGAAGCCCGAATCCGATA
TGATAGCCTTGATCCACCATGCCATTGACAGTGGCATCACTTTACTTGAC
ACTTCCGATTCTTACGGACCTCACACAAATGAAATCCTTCTGGGCAAGGC
TCTGAAAGGAGGGTACAGAGGAAGAGTTGAATTGGCTACTAAATTTGGTA
TCAGATATGAGGATGGCCAGTACTCATACTGTGGGGATCCTGCTTATGTA
AGAGCTACATGTGAGGCCAGCTTGAAGCGTCTGGATGTTGACTGTATTGA
TCTTTATTACCAACATCGCATTGACACTAAAGTCCCCATTGAAGTCACGA
TTGGGGAACTCAAGAAACTAGTTGAAGAGGGTAAAATAAAGTATATAGGT
CTATCGGAGGCTTCTGCTTCAACAATTAGACGAGCTCACGCCGTCCATCC
AATAACAGCTGTGCAGTTGGAATGGTCCTTGTGCACACGAGATGTGGAGG
AAGAGATTGTTCCTACTTGCAGGGAACTTGGCATTGGAATTGTTGCTTAC
AGTCCTCTAGGACGTGAGTTTCTTTCATCCGGGCCAAAGTTGGTTGA
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