FC921634

Overview
NameFC921634
Unique NameFC921634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTG_ARATH (Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.927e-94
Identity = 156/239 (65.27%), Postives = 196/239 (82.01%), Query Frame = 2
Query:    8 SNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNLKEKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWPHSS 724
            +NFPF+ G+PFT  +W GL+GFHMT+NGRHETS AYREKLEPW V+ VKV+GG+ + S  A  LP+ +D   ++  E LKAP +S  R+ +L+GVFSTGNNF+RRMALRRSWMQY AVRSG VAVRF IGLH N +VN E+W+E++AYGDIQ MPFVDYY L+SLKT+A+CI GTK++PAKYIMKTDDDAFVRIDE+L +L+E+PS+ LL+GL+S+DSSP + Q  +W+I  EEWP  S
Sbjct:  283 ANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSGGLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEAVRSGKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSALLYGLISFDSSPDREQGSKWFIPKEEWPLDS 521          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTF_ARATH (Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.947e-74
Identity = 137/236 (58.05%), Postives = 176/236 (74.58%), Query Frame = 2
Query:   14 FPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKR-LVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNLK-EKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWP 715
            FPF  G     T+ VG +G  MTV+G+H TS A+R+ LEPW V+ +++ G   L S  A GLP SE+ + +VD+E LK+P +S  R L ++IGVFST NNF+RRMA+RR+WMQY  VRSG VAVRFF+GLHK+  VN ELW EA+ YGD+Q+MPFVDYYSLIS KT+AICIFGT++  AK+IMKTDDDAFVR+DEVL +L     + GL++GL++ DS P +    +WYIS EEWP
Sbjct:  305 FPFKQGFLSVATLRVGTEGMQMTVDGKHITSFAFRDTLEPWLVSEIRITGDFRLISILASGLPTSEESEHVVDLEALKSPTLSPLRPLDLVIGVFSTANNFKRRMAVRRTWMQYDDVRSGRVAVRFFVGLHKSPLVNLELWNEARTYGDVQLMPFVDYYSLISWKTLAICIFGTEVDSAKFIMKTDDDAFVRVDEVLLSLSMTNNTRGLIYGLINSDSQPIRNPDSKWYISYEEWP 540          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTH_ARATH (Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49
Identity = 99/242 (40.91%), Postives = 147/242 (60.74%), Query Frame = 2
Query:   11 NFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHL------KAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNL-KEKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWP 715
            ++PF +G  F  T+  G++G+H++VNGRH TS  YR        TG+ V G +D+ S +A  LP +         +HL      KAP + +K + + IG+ S GN+F  RMA+R+SWMQ   VRS  V  RFF+ LH  ++VN +L KEA+ +GDI I+P++D+Y L+ LKT+AIC +G   + AKY+MK DDD FVR+D V+    K K    L  G ++++  P +  +  W ++ EEWP
Sbjct:  334 DYPFAEGKLFVLTLRAGMEGYHISVNGRHITSFPYRTGFVLEDATGLAVKGNIDVHSVYAASLPSTNPS--FAPQKHLEMQRIWKAPSLPQKPVELFIGILSAGNHFAERMAVRKSWMQQKLVRSSKVVARFFVALHARKEVNVDLKKEAEYFGDIVIVPYMDHYDLVVLKTVAICEYGVNTVAAKYVMKCDDDTFVRVDAVIQEAEKVKGRESLYIGNINFNHKPLRTGK--WAVTFEEWP 571          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTJ_ARATH (Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.835e-48
Identity = 101/241 (41.91%), Postives = 146/241 (60.58%), Query Frame = 2
Query:   14 FPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLK------APLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNLKEKPSN-GLLFGLMSYDSSPQKRQRQQWYISNEEWP 715
            FPF     F  T+  GL+G+H++V+G+H TS  YR        TG+ + G +D+ S FA  LP S          HL+      AP +  +++ M IG+ S GN+F  RMA+RRSWMQ+  V+S  V  RFF+ LH  ++VN EL KEA+ +GDI I+P++D Y L+ LKT+AIC +G   L AK+IMK DDD FV++D VL   K+ P++  L  G ++Y   P ++ +  W ++ EEWP
Sbjct:  342 FPFTVDKLFVLTLSAGLEGYHVSVDGKHVTSFPYRTGFTLEDATGLTINGDIDVHSVFAGSLPTSHPS--FSPQRHLELSSNWQAPSLPDEQVDMFIGILSAGNHFAERMAVRRSWMQHKLVKSSKVVARFFVALHSRKEVNVELKKEAEFFGDIVIVPYMDSYDLVVLKTVAICEYGAHQLAAKFIMKCDDDTFVQVDAVLSEAKKTPTDRSLYIGNINYYHKPLRQGK--WSVTYEEWP 578          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTI_ARATH (Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.996e-46
Identity = 97/241 (40.25%), Postives = 139/241 (57.68%), Query Frame = 2
Query:   14 FPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLK------APLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNLKEKP-SNGLLFGLMSYDSSPQKRQRQQWYISNEEWP 715
            FPFV+   F  T+  GL+G+H+ V+G+H TS  YR        TG+ V G +D+ S F   LP S          HL+      AP++    + + IG+ S GN+F  RMA+R+SWMQ+  + S  V  RFF+ LH  ++VN EL KEA+ +GDI ++P++D Y L+ LKT+AIC  G     AKYIMK DDD FV++  V+  +K+ P    L  G M+Y   P +  +  W ++ EEWP
Sbjct:  333 FPFVEEKLFVLTLSAGLEGYHINVDGKHVTSFPYRTGFTLEDATGLTVNGDIDVHSVFVASLPTSHPS--FAPQRHLELSKRWQAPVVPDGPVEIFIGILSAGNHFSERMAVRKSWMQHVLITSAKVVARFFVALHGRKEVNVELKKEAEYFGDIVLVPYMDSYDLVVLKTVAICEHGALAFSAKYIMKCDDDTFVKLGAVINEVKKVPEGRSLYIGNMNYYHKPLRGGK--WAVTYEEWP 569          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GTK_ARATH (Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.454e-45
Identity = 98/244 (40.16%), Postives = 141/244 (57.79%), Query Frame = 2
Query:    5 TSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSE-DFDFIVDVE---HLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLXNLK-EKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWPHS 721
            T +FPF +G  F  T+  G+DGFH+ V GRH +S  YR        TG+ V G VD+ S  A  L  S   F     +E     KAP +      + +GV S  N+F  RMA+R++WMQ+P+++S DV  RFF+ L+  ++VN  L KEA+ +GDI I+PF+D Y L+ LKTIAIC FG + + A YIMK DDD F+R++ +L  +    P   L  G ++    P +  +  W ++ EEWP +
Sbjct:  343 TWSFPFAEGKVFVLTLRAGIDGFHINVGGRHVSSFPYRPGFTIEDATGLAVTGDVDIHSIHATSLSTSHPSFSPQKAIEFSSEWKAPPLPGTPFRLFMGVLSATNHFSERMAVRKTWMQHPSIKSSDVVARFFVALNPRKEVNAMLKKEAEYFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAPYIMKCDDDTFIRVESILKQIDGVSPEKSLYMGNLNLRHRPLRTGK--WTVTWEEWPEA 584          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GT5_PANTR (Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan troglodytes GN=B3GALT5 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 48/184 (26.09%), Postives = 90/184 (48.91%), Query Frame = 2
Query:  176 FSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRL--VMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILP-AKYIMKTDDDAFVRIDEVLXNLKEKPSNGLLF-GLMSYDSSPQKRQRQQWYISNEEWP 715
            FS ++  L   + F +  D   LK P    ++    +++ V S+      RMA+R++W +   V+   +   F +G   +     E+ +E+Q +GDI    F+D Y  ++LKT+    +  +  P A ++MKTD D F+ +D +   L +K      F G +  +  P ++   +W++S  E+P
Sbjct:   23 FSMYSLNLFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHRQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYP 206          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GT5_PANPA (Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan paniscus GN=B3GALT5 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 48/184 (26.09%), Postives = 90/184 (48.91%), Query Frame = 2
Query:  176 FSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRL--VMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILP-AKYIMKTDDDAFVRIDEVLXNLKEKPSNGLLF-GLMSYDSSPQKRQRQQWYISNEEWP 715
            FS ++  L   + F +  D   LK P    ++    +++ V S+      RMA+R++W +   V+   +   F +G   +     E+ +E+Q +GDI    F+D Y  ++LKT+    +  +  P A ++MKTD D F+ +D +   L +K      F G +  +  P ++   +W++S  E+P
Sbjct:   23 FSMYSLNLFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGDIIQKDFLDGYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYP 206          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GT1_PONPY (Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 2
Query:  278 MLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIA----ICIFGTKILPAKYIMKTDDDAFVRIDEVLXNL---KEKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWPHSS 724
            ++I + +T   F+ R A+R +W      +   +A  F +G + +  +N  + +E+Q + DI +  F+D Y  ++LKT+     +  F +K   AKY+MKTD D FV +D ++  L     KP      G +  +  P +  R +WY+  + +P S+
Sbjct:   80 LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK---AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSN 231          
BLAST of FC921634 vs. ExPASy Swiss-Prot
Match: B3GT1_PANTR (Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 2
Query:  278 MLIGVFSTGNNFERRMALRRSWMQYPAVRSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIA----ICIFGTKILPAKYIMKTDDDAFVRIDEVLXNL---KEKPSNGLLFGLMSYDSSPQKRQRQQWYISNEEWPHSS 724
            ++I + +T   F+ R A+R +W      +   +A  F +G + +  +N  + +E+Q + DI +  F+D Y  ++LKT+     +  F +K   AKY+MKTD D FV +D ++  L     KP      G +  +  P +  R +WY+  + +P S+
Sbjct:   80 LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSK---AKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSN 231          
The following BLAST results are available for this feature:
BLAST of FC921634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
B3GTG_ARATH4.927e-9465.27Probable beta-1,3-galactosyltransferase 16 OS=Arab... [more]
B3GTF_ARATH1.947e-7458.05Beta-1,3-galactosyltransferase 15 OS=Arabidopsis t... [more]
B3GTH_ARATH1.659e-4940.91Probable beta-1,3-galactosyltransferase 17 OS=Arab... [more]
B3GTJ_ARATH1.835e-4841.91Probable beta-1,3-galactosyltransferase 19 OS=Arab... [more]
B3GTI_ARATH4.996e-4640.25Probable beta-1,3-galactosyltransferase 18 OS=Arab... [more]
B3GTK_ARATH1.454e-4540.16Probable beta-1,3-galactosyltransferase 20 OS=Arab... [more]
B3GT5_PANTR8.051e-1226.09Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan... [more]
B3GT5_PANPA1.373e-1126.09Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan... [more]
B3GT1_PONPY1.373e-1128.21Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus... [more]
B3GT1_PANTR1.373e-1128.21Beta-1,3-galactosyltransferase 1 OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionC32107E12EF RVDevelopN Citrus clementina cDNA clone C32107E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921634 ID=FC921634; Name=FC921634; organism=Citrus clementina; type=EST; length=724bp
ATGAACCTCTAACTTCCCATTTGTGGATGGGAATCCGTTCACCACCACAA
TATGGGTTGGTTTGGATGGTTTCCATATGACTGTGAATGGAAGGCACGAA
ACATCGTTAGCATATAGGGAGAAACTCGAACCATGGTCGGTTACTGGAGT
TAAAGTGGCCGGTGGTGTGGATCTATTTTCTGCCTTTGCTGAAGGCTTGC
CTGTGTCTGAAGACTTTGATTTTATAGTTGATGTTGAACACCTCAAAGCT
CCCTTGATTTCCAGGAAAAGACTTGTAATGTTGATAGGGGTTTTCTCTAC
TGGAAATAATTTTGAGCGTCGTATGGCACTGAGAAGATCTTGGATGCAGT
ACCCAGCTGTACGGTCTGGGGATGTAGCTGTCCGGTTTTTCATTGGCCTT
CACAAGAACAGGCAAGTCAATTTTGAACTATGGAAAGAAGCTCAAGCATA
TGGGGATATCCAAATAATGCCTTTTGTTGATTATTATAGCCTAATCAGTC
TAAAAACAATTGCAATTTGCATTTTCGGGACCAAGATCCTCCCTGCTAAA
TATATCATGAAAACCGATGATGATGCTTTTGTTAGAATTGATGAAGTTCT
CTNCAACCTCAAGGAGAAACCATCTAATGGCCTCTTATTCGGTCTTATGT
CTTATGATTCATCACCTCAGAAGAGACAAAGACAGCAATGGTATATCAGT
AATGAGGAATGGCCGCATTCCTCA
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