FC921643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921643 vs. ExPASy Swiss-Prot
Match: PTPM1_MOUSE (Protein-tyrosine phosphatase mitochondrial 1 OS=Mus musculus GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25 Identity = 69/184 (37.50%), Postives = 102/184 (55.43%), Query Frame = 3 Query: 156 AKRALVGAG-ARILFYPTLLYNVFRNKIQ--AEFRWWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVVLAPSQWKAVQEFSQK 686 A A + AG AR+LFYPTLLY VFR +++ A W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L + T D P+ ++ + V F G+ YVHCKAGR RS T+V YL++ + +P A+E + R + + PSQ + ++EF ++ Sbjct: 2 AASAWLEAGLARVLFYPTLLYTVFRGRVRGPAHRDWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKE 185
BLAST of FC921643 vs. ExPASy Swiss-Prot
Match: PTPM1_RAT (Protein-tyrosine phosphatase mitochondrial 1 OS=Rattus norvegicus GN=Ptpmt1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 70/184 (38.04%), Postives = 101/184 (54.89%), Query Frame = 3 Query: 156 AKRALVGAG-ARILFYPTLLYNVFRNKI--QAEFRWWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVVLAPSQWKAVQEFSQK 686 A A + AG AR+LFYPTLLY VFR ++ A W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L + T D P+ ++ R V F G+ YVHCKAGR RS T+V YL++ + +P A+E + R + + PSQ + ++EF ++ Sbjct: 2 AASAWLEAGLARVLFYPTLLYTVFRGRVGGPAHRDWYHRIDHTVLLGALPLRSMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKNVGVEQLRLSTVDMTGVPTLANLHRGVQFALKYQSLGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEILKEFHKE 185
BLAST of FC921643 vs. ExPASy Swiss-Prot
Match: PTPM1_HUMAN (Protein-tyrosine phosphatase mitochondrial 1 OS=Homo sapiens GN=PTPMT1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23 Identity = 68/184 (36.96%), Postives = 101/184 (54.89%), Query Frame = 3 Query: 156 AKRALVGAG-ARILFYPTLLYNVFRNKI--QAEFRWWDEVDQFLLLGAVPFPKDVPRLKQ-LGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVVLAPSQWKAVQEFSQK 686 A AL+ AG AR+LFYPTLLY +FR K+ +A W+ +D +LLGA+P +L Q V GVIT+NE YET S + G++ L + T D P+ ++++ V F G+ YVHCKAGR RS T+V YL++ +P A+ + R + + P Q ++EF ++ Sbjct: 2 AATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQ 185
BLAST of FC921643 vs. ExPASy Swiss-Prot
Match: PTPM1_DROME (Protein-tyrosine phosphatase mitochondrial 1-like protein OS=Drosophila melanogaster GN=Plip PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 3 Query: 183 ARILFYPTLLYNVFRNKIQAEFRWWDEVDQFLLLGAVPFPKDVPRL-KQLGVGGVITLNEPYETLVPSS---LYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIH------------SNSCAGK---TTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVVLAPSQWKAVQEFSQKN 689 AR+ FYPTLLYNV K A W+D +D+ ++LGA+PF L ++ + V+++NE YE S+ + GI+ L + T D +P+ + R V+FI+ S+S + + YVHCKAGR RS T+V CYL+ P A++++R RP ++L QW A++ F N Sbjct: 9 ARVSFYPTLLYNVLMEKASAR-NWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRPHILLHTKQWDALRLFYTNN 195 The following BLAST results are available for this feature:
BLAST of FC921643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921643 ID=FC921643; Name=FC921643; organism=Citrus clementina; type=EST; length=712bpback to top |