FC923090

Overview
NameFC923090
Unique NameFC923090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC923090_ssr29 microsatellite FC923090_ssr29:29..49. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14655 contig Ccv1_Contig14655:58..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.160e-78
Identity = 138/184 (75.00%), Postives = 155/184 (84.24%), Query Frame = 2
Query:   92 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKFI 643
            + IL IGGTGYIGKFIVEAS KAGH TFVLVRES +S P+K++L+D FK+ GV  V GD+ +HESLVKAIKQVDVVISTVGHALLADQVK+IAAIKEAGNVKRFFPSEFGNDVDRVH AVEP K+ ++ KA+IRR VEAEGIP+TYV  +FF GY LPNL QPGA  PP DKVVI G GN K +
Sbjct:    5 SKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAV 187          

HSP 2 Score: 43.1282 bits (100), Expect = 1.160e-78
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  651 DDIGTYTIKAVDDPRTLNKKLYI 719
            +DIGTYTI AVDDP+TLNK LYI
Sbjct:  192 EDIGTYTINAVDDPKTLNKILYI 214          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.147e-66
Identity = 123/192 (64.06%), Postives = 144/192 (75.00%), Query Frame = 2
Query:   83 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQ--PGATAPPRDKVVIFGDGNQKFITGR 652
            +E + IL IGGTGYIGKF+VEAS KAGH TF LVRE+ +S P K + +  FK+LGV I+ GD+ +HESLVKAIKQVDVVISTVG   + DQ KII+AIKEAGNVKRF PSEFG DVDR   AVEP KS +  K +IRR +EAEGIPYTY     F GY+LP L+Q  PG T+PPRDKV I GDGN K +  +
Sbjct:    3 TEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINK 193          

HSP 2 Score: 41.9726 bits (97), Expect = 1.147e-66
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  651 DDIGTYTIKAVDDPRTLNKKLYI 719
            +DI  YTIKAVDDPRTLNK LYI
Sbjct:  195 EDIAAYTIKAVDDPRTLNKILYI 217          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 3.315e-66
Identity = 120/188 (63.83%), Postives = 141/188 (75.00%), Query Frame = 2
Query:   80 VSEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKFI 643
            VSE + IL IGGTGYIGK++VE S K+GHPTF L+RES +  P KS+L+D FK+ GV ++ GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGN+KRF PSEFG DVD    A+EP  S + +K +IRR +EAEGIPYTYV   +F  +FLPNL Q  A  PPRDKVVIFGDGN K I
Sbjct:    3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAI 189          

HSP 2 Score: 40.0466 bits (92), Expect = 3.315e-66
Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  651 DDIGTYTIKAVDDPRTLNKKLYI 719
            +DI TYTI+AVDDPRTLNK L++
Sbjct:  194 EDIATYTIEAVDDPRTLNKTLHM 216          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.457e-57
Identity = 113/191 (59.16%), Postives = 137/191 (71.73%), Query Frame = 2
Query:   98 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRE--------SIVSGP---SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 637
            IL +G TG IG+ +V AS+KAG+PT+ L+R+        S+V+     SK +LL  FK  GV ++ GD+ +HE+LVKAIKQVD VI T G  L+ DQVKII AIKEAGNVKRFFPSEFG DVDR H AV+P +  +D KA IRR VEAEG+PYTY+  + F GYFL NL Q  AT PPRDKV+I GDGN K
Sbjct:    7 ILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVK 196          

HSP 2 Score: 38.1206 bits (87), Expect = 1.457e-57
Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = 3
Query:  654 DIGTYTIKAVDDPRTLNKKLYI 719
            D+GTYTI+A +DPRTLNK ++I
Sbjct:  204 DVGTYTIRAANDPRTLNKAVHI 225          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.694e-56
Identity = 108/191 (56.54%), Postives = 138/191 (72.25%), Query Frame = 2
Query:   98 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-----------IVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 637
            IL +G TG IG+ IV AS+KAG+PT+ LVR++             +  +K +L+D++++LGV ++ GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGNVK+FFPSEFG DVDR H AVEP +  ++ KA IRR +EAEG+PYTY+  + F GYFL NL Q   T PPRDKVVI GDGN K
Sbjct:    7 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVK 196          

HSP 2 Score: 34.6538 bits (78), Expect = 2.694e-56
Identity = 13/22 (59.09%), Postives = 19/22 (86.36%), Query Frame = 3
Query:  654 DIGTYTIKAVDDPRTLNKKLYI 719
            D+GT+TI+A +DP TLNK ++I
Sbjct:  204 DVGTFTIRAANDPNTLNKAVHI 225          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.104e-54
Identity = 108/189 (57.14%), Postives = 135/189 (71.43%), Query Frame = 2
Query:   98 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESI--VSGP---------SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGN 631
            IL +G TG IG+ IV AS+KAG+PT+ LVR++   V+ P         +K +LL +++  GV ++ GD+ +HE+LV AIKQVD VI   G  L+ DQVK+I AIKEAGNVKRFFPSEFG DVDR H AVEP +  ++ KA IRR VE+EG+PYTY+  + F GYFL NL Q  AT PPRDKVVI GDGN
Sbjct:    7 ILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGN 194          

HSP 2 Score: 36.1946 bits (82), Expect = 1.104e-54
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 3
Query:  654 DIGTYTIKAVDDPRTLNKKLYI 719
            D+GTYTI+A +DP TLNK ++I
Sbjct:  204 DVGTYTIRAANDPNTLNKAVHI 225          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.768e-52
Identity = 100/187 (53.48%), Postives = 127/187 (67.91%), Query Frame = 2
Query:   83 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKFI 643
            SE + IL +GGTGY+G+ +V AS + GHPT  LVR++  S P+K+ LL  F++ GV ++ GD+ +  SLV A+K  DVVIS +G   +ADQ +++ AIKEAGNVKRFFPSEFG DVDR  G VEP KS    K  IRRA EA GIPYTY    FF G+ LP + Q  A  PP DK V+ GDG+ K +
Sbjct:    3 SEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAV 188          

HSP 2 Score: 34.2686 bits (77), Expect = 3.768e-52
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  654 DIGTYTIKAVDDPRTLNKKLYI 719
            DI TYT+ A DDPR  NK LYI
Sbjct:  194 DIATYTVLAADDPRAENKVLYI 215          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.042e-46
Identity = 88/188 (46.81%), Postives = 120/188 (63.83%), Query Frame = 2
Query:   92 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQK 637
            + +L +GGTGY+G+ IV+AS++ GH TF+L R  I     K Q+L  FK  G  +V     +H+SLV A+K VDVVI T+       H LL  Q+K++ AIK+AGN+KRF PSEFG D   +  A+EP + T+D K  +R+A+E   IP+TY+    F GYF  NL Q     PPRDKV+++GDGN K
Sbjct:    4 SKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVK 190          

HSP 2 Score: 41.9726 bits (97), Expect = 8.042e-46
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  651 DDIGTYTIKAVDDPRTLNKKLYI 719
            DD+ TYTIK +DDPRTLNK +Y+
Sbjct:  197 DDVATYTIKTIDDPRTLNKTVYL 219          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 9.211e-41
Identity = 86/183 (46.99%), Postives = 118/183 (64.48%), Query Frame = 2
Query:   98 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-SIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKFI 643
            IL +G TGY+GK++V+AS+  GHPT+  V      S  SK QLL  F++LGV I  G++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGN+KRF PSEFGN+VDRV  A+   ++  D K KIRRA EA GIP+T+V       YF+  LL P   +   ++V I+G G+ K +
Sbjct:    8 ILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAV 186          

HSP 2 Score: 32.3426 bits (72), Expect = 9.211e-41
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  651 DDIGTYTIKAVDDPRTLNKKLYI 719
            +D+  YTIKA DDPR  N+ L I
Sbjct:  191 EDVAAYTIKAADDPRAANRVLII 213          
BLAST of FC923090 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.564e-40
Identity = 85/183 (46.45%), Postives = 119/183 (65.03%), Query Frame = 2
Query:   92 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESIVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVEFYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNQKF 640
            + IL  GGTGYIG  +V+ S+K GHPT+V  R +     SK+ LLD F++LG  IV G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV    F  YF+  LL+P     P+D++ ++G G  KF
Sbjct:    8 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN----SSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKF 182          

HSP 2 Score: 29.6462 bits (65), Expect = 1.564e-40
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  654 DIGTYTIKAVDDPRTLNK 707
            DIG YTIK   DPR LN+
Sbjct:  189 DIGLYTIKVATDPRALNR 206          
The following BLAST results are available for this feature:
BLAST of FC923090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU1.160e-7875.00Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_ARATH1.147e-6664.06Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFRH_TOBAC3.315e-6663.83Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_CICAR1.457e-5759.16Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_MEDSA2.694e-5656.54Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA1.104e-5457.14Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE3.768e-5253.48Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL8.042e-4646.81Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY9.211e-4146.99Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA1.564e-4046.45Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A01EF StrClemenN Citrus clementina cDNA clone C31701A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923090 ID=FC923090; Name=FC923090; organism=Citrus clementina; type=EST; length=719bp
GATACAAGGCGCCGGTATCATTTCATTCAATAATAATAATAATAATAATA
AACAAACTCTCCGGAATTGAACTGAACGAGTTTCAGAAATGGCATCGATT
CTATCCATCGGCGGGACAGGGTATATCGGTAAATTCATCGTGGAAGCAAG
CGTGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGGGAATCCATAGTCT
CAGGTCCTTCCAAATCTCAGCTCCTCGACCACTTCAAAAACCTCGGCGTC
AAAATCGTTGTCGGAGATGTTTTGAATCACGAGAGTTTGGTGAAGGCGAT
AAAACAAGTGGACGTGGTGATATCGACAGTCGGTCACGCTTTATTAGCCG
ATCAGGTCAAGATTATTGCTGCCATTAAAGAAGCCGGTAACGTTAAGAGA
TTCTTCCCATCGGAATTTGGAAATGATGTTGATCGAGTCCATGGCGCCGT
GGAGCCAACAAAATCGACGTATGACGTAAAGGCGAAAATCCGCCGAGCCG
TTGAGGCAGAAGGCATTCCGTACACTTACGTAGAATTTTATTTTTTTGAT
GGCTACTTCCTCCCTAATTTGTTGCAGCCTGGGGCCACTGCCCCCCCTAG
GGATAAGGTTGTCATCTTCGGCGATGGAAATCAAAAGTTTATAACAGGGA
GATGATATTGGNACCTACACTATCAAAGCAGTTGATGATCCGAGAACCTT
GAACAAAAAACTTTACATT
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