FC923100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923100 vs. ExPASy Swiss-Prot
Match: YC47_SCHPO (Uncharacterized WD repeat-containing protein C1672.07 OS=Schizosaccharomyces pombe GN=SPCC1672.07 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 75/217 (34.56%), Postives = 107/217 (49.31%), Query Frame = 1 Query: 1 SSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSSGLPTFKQQIPDLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTENLKVENKTKPDIPVSQFIQLLHSCADMKNFQHL 651 ++ +DG++R WD+ ID+I T+L+ +P D LAT HVDQ G+ LW N MF S ++V V PSVS +G ++ +V +D S T Q P+L TLS LP++QWQ+LINL+ IKARN APFFLPS+ S + K +T+ K + ++F LLH D F++L Sbjct: 589 TASLDGTIRTWDLPTGHLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLSMFKHVST--KALRLDDVVEVSAPSVSGEKGISVVEAAL-NVESNAEDEEDIS-YRTMDQLDPNLQTLSKLPRTQWQTLINLEAIKARNAPKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKPTAVASIK----VSGTEFSTLLHGNDDDAFFEYL 797
BLAST of FC923100 vs. ExPASy Swiss-Prot
Match: WDR36_HUMAN (WD repeat-containing protein 36 OS=Homo sapiens GN=WDR36 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.746e-20 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 1 Query: 1 SSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGC---QDENSSQPDVHRTDRVPKDSSGLPTFKQQIPDLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSL 501 S+ MD S+R WD+ ID +D + +S+SP D LAT+HVD G+YLW N ++S S + + + +PS+ + G QD S+ V +D + + S +Q LVTLSLLP+S+W++L+NLD+IK +N APFF+P++P L Sbjct: 639 SAAMDCSIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHVDHLGIYLWSNISLYS-------VVSLRPLPADYVPSIVMLPGTCQTQDVEVSEETVEPSDELIEYDSP----EQLNEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGL 797
BLAST of FC923100 vs. ExPASy Swiss-Prot
Match: UTP21_YEAST (U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces cerevisiae GN=UTP21 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 57/178 (32.02%), Postives = 85/178 (47.75%), Query Frame = 1 Query: 1 SSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDS--NIDSYASGKEIVSVKMPSV------SSVEGCQDENSSQPDVHRTDRVPKDSSGLPTFKQQIPDLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGE 510 S+ +D ++R WD+ ID I VD T + SPN D+LAT HV NG+ +W NR F S ID E + +PS S + G + N + D D + + +Q +L+TLS+ P+S+ +L++LD+I+ R+ PFFL LSGE Sbjct: 602 SASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQFKTVSTRTIDE----SEFARMALPSTSVRGNDSMLSGALESNGGE------DLNDIDFNTYTSLEQIDKELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFL----QLSGE 765 The following BLAST results are available for this feature:
BLAST of FC923100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923100 ID=FC923100; Name=FC923100; organism=Citrus clementina; type=EST; length=727bpback to top |