FC923106

Overview
NameFC923106
Unique NameFC923106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14386 contig Ccv1_Contig14386:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.317e-82
Identity = 145/191 (75.92%), Postives = 162/191 (84.82%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            ME FP+ID+ KLNG+ER+ TME I DACENWGFFELVNHGISHEL+DTV+RLTKEHY KCM+QRFK+MVA+KGLEAVQSE+NDLDWESTFFLRHLPVSN++EIPDLE D+RKAMKEFA +LEK+A                  KK FYGSKGPTFGTKVSNYPPCP+P+LIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNK 191          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 8.207e-80
Identity = 140/191 (73.30%), Postives = 158/191 (82.72%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L KLNG ER ATMEMI DACENWGFFELVNHGI HE++DTV++LTK HY KCM+QRFK++VASKGLEAVQ+EV DLDWESTFFLRHLPVSN++E+PDL+D+YR+ M++FA  LEK+A                  KK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 8.207e-80
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.526e-78
Identity = 136/191 (71.20%), Postives = 160/191 (83.77%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPI+D+ KLN ++R +TME+I DACENWGFFE VNHGIS E++DTV++LTKEHY KCM+QRFK+MVA+KGLE VQSE++DLDWESTFFLRHLPVS+++EIPDL+DDYRK MKEFA++LE++A                  KK FYGSKGP FGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIVDMGKLNTEDRKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEIDDLDWESTFFLRHLPVSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.526e-78
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.384e-78
Identity = 136/191 (71.20%), Postives = 157/191 (82.20%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L KLNG ER+ TMEMI DACENWGFFELVNHGI HE++DTV+++TK HY KCM+QRFK++VASKGLEAVQ+EV DLDWESTFFLRHLPVSN+ E+PDL+D YR+ M++FA  LEK+A                  KK+FYG+KGP FG+KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 7.511e-78
Identity = 135/191 (70.68%), Postives = 157/191 (82.20%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L KLNGDER+ TMEMI DACENWGFFELVNHGI HE++DTV+++TK HY KCM+QRFK++VASKGLEAVQ+EV DLDWESTFFLRHLP SN++++PDL+++YR+ M++FA  LEK+A                  K  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 7.511e-78
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 7.511e-78
Identity = 137/191 (71.73%), Postives = 160/191 (83.77%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            M  FP++DLS +NG+ER+AT+E INDACENWGFFELVNHG+S ELLDTV+++TK+HY K M+QRFK+MVA+KGL+ VQSE++DLDWESTFFLRHLP SN++EIPDLE++YRK MKEFAVELEK+A                  KKVFYGSKGP FGTKVSNYPPCPKPDLIKGLRAH+DAGGIILLFQ  K
Sbjct:    1 MATFPVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDDVQSEIHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 7.511e-78
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.278e-77
Identity = 135/191 (70.68%), Postives = 156/191 (81.68%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L  LNGDER+ TMEMI DACENWGFFELVNHGI HE++DTV++LTK HY KCM+QRFK++VASKGLEAVQ+EV DLDWESTFFLRHLP SN++++PDL+++YR+ M++FA  LEK+A                  K  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.278e-77
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.666e-77
Identity = 137/191 (71.73%), Postives = 157/191 (82.20%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            M  FP++D+  +NG+ER+AT+E INDACENWGFFELVNHGIS ELLDTV+++ K+HY K M+QRFK+MVA+KGLEAVQSE++ LDWESTFFLRHLP SN++EIPDLE+DYRK MKEFAVELEK+A                  KK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MATFPVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.666e-77
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.666e-77
Identity = 137/191 (71.73%), Postives = 155/191 (81.15%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L  L G ER ATMEMI DACENWGFFELVNHGI HE++DTV++ TK HY KCM+QRFK++VASKGLEAVQ+EV DLDWESTFFLRHLPVSN++E+PDL+D+YR+ M++FA  LEK+A                  KK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.666e-77
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.660e-75
Identity = 130/189 (68.78%), Postives = 156/189 (82.54%), Query Frame = 3
Query:   93 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            +FP+I+++ LNG+ R + +  INDACENWGFFELVNHGISHEL+D V++LTKEHY KCM+QRFK+MVASKGL++V++E+ND DWESTFFLRHLPVSNM+EI DL+++Y+K MKEFA ELEK+A                  KKVFYGSKGP FGTKVSNYPPCPKP+LIKGLRAHTDAGG+ILLFQ  K
Sbjct:    4 DFPVINMNNLNGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDSVETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDK 192          
The following BLAST results are available for this feature:
BLAST of FC923106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ACCO_ACTDE1.317e-8275.921-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO3_PETHY8.207e-8073.301-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO_PEA1.526e-7871.201-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_TOBAC4.384e-7871.201-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO1_SOLLC7.511e-7870.681-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO1_MALDO7.511e-7871.731-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO4_SOLLC1.278e-7770.681-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_MALDO1.666e-7771.731-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO4_PETHY1.666e-7771.731-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_CUCME2.660e-7568.781-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionC31701B07EF StrClemenN Citrus clementina cDNA clone C31701B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923106 ID=FC923106; Name=FC923106; organism=Citrus clementina; type=EST; length=679bp
GGACGCAGACACAACCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAGA
AGGGAGATTGTGGGAGTTAAGAAACAACAAATAACAATGGAGAATTTTCC
AATTATTGACTTGTCAAAGCTCAATGGTGATGAGAGAAGTGCTACCATGG
AAATGATCAATGATGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGAAT
CATGGGATATCACATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAGGA
GCATTACGGGAAGTGTATGGACCAAAGATTCAAGCAAATGGTGGCAAGCA
AGGGCCTTGAAGCTGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAAGC
ACTTTCTTCTTGCGCCACCTTCCTGTTTCAAACATGGCTGAAATCCCCGA
TCTTGAAGATGATTACAGGAAGGCAATGAAGGAATTTGCCGTTGAATTGG
AGAAGGTTGCTGAGCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGCTG
GAGGAAGGGTATTTGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACCTT
TGGCACCAAGGTCAGCAATTACCCTCCATGCCCAAAACCAGATCTGATCA
AGGGACTTAGGGCCCATACTGATGCTGGTGGCATCATCTTGCTCTTTCAG
ATGACGAAGTCAGTGGCCTCCAGCTGCTC
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