FC923123

Overview
NameFC923123
Unique NameFC923123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14388 contig Ccv1_Contig14388:1..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923123 vs. ExPASy Swiss-Prot
Match: MGST3_MOUSE (Microsomal glutathione S-transferase 3 OS=Mus musculus GN=Mgst3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23
Identity = 55/131 (41.98%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  181 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRL--TIGKYGFLVLLGLMVCT 567
            L  EYG+V L       +   +   VG ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +I+ R  Y  GY TGDP KR    +G      L+G  VC+
Sbjct:    4 LSKEYGFVLLTGAASFVMVLHLAINVGKARKKYKVEYPVMYSTDPEN--GHMFNCIQRAHQNTLEVYPPFLFFLTVGGVYHPRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLALFALMGTTVCS 132          
BLAST of FC923123 vs. ExPASy Swiss-Prot
Match: MGST3_BOVIN (Microsomal glutathione S-transferase 3 OS=Bos taurus GN=MGST3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  181 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLVLLGLMVCTISFGINQL 591
            L  EYG+V L       +   +   V  ARKKYKV YPT+Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P+KR   G   F+ L+GLM  T+      L
Sbjct:    4 LSKEYGFVILTGAASFLMVTHLAINVSKARKKYKVEYPTMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIVSGLGLAWIVGRVLYAYGYYTGEPRKRQR-GALSFIALIGLMGTTVCSAFQHL 137          
BLAST of FC923123 vs. ExPASy Swiss-Prot
Match: MGST3_HUMAN (Microsomal glutathione S-transferase 3 OS=Homo sapiens GN=MGST3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22
Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  181 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLVLLGLMVCTISFGINQL 591
            L  EYG+V L       +   +   V  ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P KR + G  G + LLGL+  T+      L
Sbjct:    4 LSKEYGFVLLTGAASFIMVAHLAINVSKARKKYKVEYPIMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIASGLGLAWIVGRVLYAYGYYTGEPSKR-SRGALGSIALLGLVGTTVCSAFQHL 137          
The following BLAST results are available for this feature:
BLAST of FC923123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGST3_MOUSE2.605e-2341.98Microsomal glutathione S-transferase 3 OS=Mus musc... [more]
MGST3_BOVIN2.605e-2342.34Microsomal glutathione S-transferase 3 OS=Bos taur... [more]
MGST3_HUMAN2.880e-2241.61Microsomal glutathione S-transferase 3 OS=Homo sap... [more]
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Properties
Property NameValue
Genbank descriptionC31701D01EF StrClemenN Citrus clementina cDNA clone C31701D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923123 ID=FC923123; Name=FC923123; organism=Citrus clementina; type=EST; length=716bp
CTCGCCGGGGGACTAGACCAAAAGTTGTATTTTGACCAGTAGTTTCATTT
TAATTTTTAAAAGAGAAAGAAAGAGATCAGTTCCTGCAATTCCTATTTCA
TATCGTTCGTTGGTCAACGTTGTCTCTTGGGTGAGATGTTTTCATCGATC
GACTCGACTATGGCGGATGCAACTCAATTTCTGCCAACAGAATACGGATA
TGTGGCTCTTGTTCTTGTTTTCTACTGCTTTCTCAATTTCTGGATGGGTT
TTCAAGTTGGCGCTGCCCGCAAGAAGTATAAGGTGCCCTATCCTACCCTC
TACGCTGTAGAATCTGAGAATAAAGATGCTAAGCTCTTTAACTGCGTTCA
GAGAGGGCATCAGAACTCTTTGGAACTTATGCCGGTGTTTTTCATGTTGA
TGATAGTCGGAGGGCTAAAGCATCCATGTGTTTGTGCCGTACTCGGATCC
CTTTTCATTGTCACTCGTTTTTTCTACTTCAAAGGCTATGCTACTGGCGA
TCCTCAGAAACGCCTCACTATTGGGAAATATGGATTCTTGGTTTTGCTTG
GACTGATGGTCTGCACAATTTCATTTGGGATCAATCAACTTCGAGGAATA
ACACTTGTAGTTCATCCTTTCTTTTGCATGGGACTCGCTTTCCCTCTACC
CACCTTTTTTATTCTCTATTTCTCTGGNAGCAGTTTTATGTTTTTGTGTT
GGTAGCAAACTACATG
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