FC923126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.806e-18 Identity = 42/48 (87.50%), Postives = 47/48 (97.92%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTD+ LLTQ+KDGFAEGKDLV++VMS+MGEEQICALKDIGPK Sbjct: 112 KDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.163e-18 Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTD+TLL Q+KDGFAEGKDLVL+VMS+MGEEQIC +KDIGPK Sbjct: 112 KDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.163e-18 Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTD+TLL Q+KDGFAEGKDLVL+VMS+MGEEQIC +KDIGPK Sbjct: 112 KDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.066e-17 Identity = 40/48 (83.33%), Postives = 48/48 (100.00%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDL+LPTD++LLTQ+KDGFA+GKDLV++VMS+MGEEQICALKDIGPK Sbjct: 112 KDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.818e-17 Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDL+LPTD+ LLTQ+KDGF EGKDLV++VMS+MGEEQICALKDIGPK Sbjct: 112 KDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.818e-17 Identity = 40/49 (81.63%), Postives = 48/49 (97.96%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 148 KDDLRLPTDE LL+Q+KDGFAEGKDLV++VMS+MGEE+IC+LKDIGPK+ Sbjct: 112 KDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPKN 160
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.051e-17 Identity = 40/49 (81.63%), Postives = 48/49 (97.96%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 148 KDDL+LPTD++LLTQ+KDGFAEGKDLV++VMS+MGEEQICALKDIG K+ Sbjct: 113 KDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGKN 161
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.539e-16 Identity = 40/48 (83.33%), Postives = 47/48 (97.92%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTD++LL+Q+KDGFAEGKDLV++VMS+MGEEQI ALKDIGPK Sbjct: 112 KDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.011e-16 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTDETL+ Q+K+GF GKDLV+TV S+MGEEQICALKD+GPK Sbjct: 113 KDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of FC923126 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.011e-16 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 2 KDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 145 KDDLRLPTD+ LL +KDGFAEGKDLVL+VMS+MGEEQIC +KD+GPK Sbjct: 112 KDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159 The following BLAST results are available for this feature:
BLAST of FC923126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923126 ID=FC923126; Name=FC923126; organism=Citrus clementina; type=EST; length=398bpback to top |