FC923141

Overview
NameFC923141
Unique NameFC923141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3371 contig Ccv1_Contig3371:189..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_ARATH (Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.512e-103
Identity = 178/225 (79.11%), Postives = 201/225 (89.33%), Query Frame = 1
Query:   55 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWIPS 729
            MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD ++SY V++ GLI+N + LF++DIR LPKYN+TATLQCAGNRRTAMS VR V+GVGWDVSAIGNAVW GAKLADVLELVGIP LT+ T  G +HV+FVS+D+CKEENGGPYKASI LSQAT+PEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSV  W+ S
Sbjct:    1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVK-WLDS 224          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_CHICK (Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 3.333e-53
Identity = 113/229 (49.34%), Postives = 146/229 (63.76%), Query Frame = 1
Query:   40 EEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            +EA   P    P  ++ +PPRHP L++NS++PFNAEPP   L   ++TP + F+ RNH P+P V+   SY + + G    +  L + ++R   PK+ +TATLQCAGNRR+ MS VR VKG+ WD+ AI  A W GA L DVL   G P        GG+HV F  +D   +  G PY ASIP  +A SP ADVLLAYEMNG  L RDH +P+RVVVPGV+GARSV  W+
Sbjct:   85 DEAPAAPDAQDP--FAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEP-SSYRLRVDGPGGRTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGASLRDVLLHAGFPE----ELQGGEHVCFEGLDA--DPGGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHRFPVRVVVPGVVGARSVK-WL 303          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_RAT (Sulfite oxidase, mitochondrial OS=Rattus norvegicus GN=Suox PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 8.209e-52
Identity = 109/223 (48.88%), Postives = 141/223 (63.23%), Query Frame = 1
Query:   58 PGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            P L A   YS +P RHP L+INS+ PFNAEPP   L  SY+TP   F+ RNH P+P +D  ++Y + + G     S  L + D+   PK+ +T TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G        R    HV F  +D   +  G  Y ASIPL++A  P+A+VLLAYEMNG+PL RDHG+P+RVVVPGV+GAR V  W+
Sbjct:  169 PPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELLTESYITPNPIFFTRNHLPVPNLDP-DTYRLHVVGAPGGQSLSLSLDDLHKFPKHEVTVTLQCAGNRRSEMNKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG-----HRLRETEAHVCFEGLDS--DPTGTAYGASIPLARAMDPQAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVK-WL 382          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_MOUSE (Sulfite oxidase, mitochondrial OS=Mus musculus GN=Suox PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.829e-51
Identity = 110/228 (48.25%), Postives = 141/228 (61.84%), Query Frame = 1
Query:   43 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            E S  P + A   Y+ +P RHP L+INS+ PFNAEPP   L   Y+TP   F+ RNH P+P +D   +Y + + G     S  L + D+   PK+ +T TLQCAGNRR+ MS V+ VKG+ W   AI  A W+GA+L DVL   G     S       HV F  +D   +  G  Y ASIPL++A  PEA+VLLAYEMNG+PL RDHG+P+RVVVPGV+GAR V  W+
Sbjct:  164 EDSMSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELLTEGYITPNPIFFTRNHLPVPNLDP-HTYRLHVVGAPGGQSLSLSLDDLHKFPKHEVTVTLQCAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHRLCDSEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVK-WL 382          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_MACFA (Sulfite oxidase, mitochondrial OS=Macaca fascicularis GN=SUOX PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 108/228 (47.37%), Postives = 140/228 (61.40%), Query Frame = 1
Query:   43 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            E    P +     Y+ +P RHP L++NS+ PFNAEPP   L  +Y+TP   F+ RNH P+P +D  ++Y + I G     S  L + D+   PKY IT TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G     +       HV F  +D   +  G  Y ASIPL++A  PEA VLLAYEMNG+PL RDHG+P+RVVVPGV+GAR V  W+
Sbjct:  163 EDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFTRNHLPVPNLDP-DTYRLHIVGAPGGQSLSLSLDDLHNFPKYEITVTLQCAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAKAGHQLCETEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAGVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVK-WL 381          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_HUMAN (Sulfite oxidase, mitochondrial OS=Homo sapiens GN=SUOX PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50
Identity = 106/228 (46.49%), Postives = 141/228 (61.84%), Query Frame = 1
Query:   43 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            E    P +     Y+ +P RHP L++NS+ PFNAEPP   L  +Y+TP   F+ RNH P+P +D  ++Y + + G     S  L + D+   P+Y IT TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G     +       HV F  +D   +  G  Y ASIPL++A  PEA+VLLAYEMNG+PL RDHG+P+RVVVPGV+GAR V  W+
Sbjct:  163 EDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFTRNHLPVPNLDP-DTYRLHVVGAPGGQSLSLSLDDLHNFPRYEITVTLQCAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHQLCETEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVK-WL 381          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: SUOX_DROME (Probable sulfite oxidase, mitochondrial OS=Drosophila melanogaster GN=CG7280 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50
Identity = 104/217 (47.93%), Postives = 142/217 (65.44%), Query Frame = 1
Query:   76 SSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGI-PNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            S +SQEP RH +L+  SK PFNAEPP   L   + TP + FY RNH P+P+++  E Y + I G  ++ K L +  I+ LPK+++TA + C GNRR+ M+ V+ VKG+ W   A+GNA WSGA+L D+L   G+ P+ T       KHV F   D   +    PY ASIPL++A  P  DV+LAYEMN EPL+RDHG+P+RV+VPG +GAR+V  W+
Sbjct:  199 SPWSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYVRNHLPVPVINP-EDYELEIEGGAKD-KTLTLDGIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQPDET-------KHVIFEGADL--DPTSHPYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNVK-WL 403          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_ASPNG (Nitrate reductase [NADPH] OS=Aspergillus niger GN=niaD PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.008e-33
Identity = 88/216 (40.74%), Postives = 124/216 (57.41%), Query Frame = 1
Query:   97 PRHP-ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITA--TLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            PR P ++++    PFN EPP +AL    ++T  + FY RNHGP+P+V  +DI ++ +SI GL+E    L  RDI  L +Y+ ITA  TL CAGNRR   + VR  KG  W  + +  A+W+G  +AD+L           +    +  K+V ++   +   G Y  SI L+ A  P   ++LA++MNGE L  DHG PLR VVPG IG RSV  W+
Sbjct:   64 PRDPRLIRLTGVHPFNVEPPLTALYDEGFLTSPELFYVRNHGPVPLVKDEDIPNWEISIEGLVEKPLVLNFRDI--LQQYDQITAPITLVCAGNRRKEQNVVRKTKGFSWGSAGLSTALWTGPMMADILR----------SAKPLRKAKYVCMEGADKLPNGYYGTSIKLNWAMDPNRGIMLAHKMNGEDLRPDHGRPLRAVVPGQIGGRSVK-WL 266          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 87/225 (38.67%), Postives = 125/225 (55.56%), Query Frame = 1
Query:   67 TAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITA--TLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            T P S+    PR  ++++    PFN EPP +AL    ++TP + FY RNHGP+P V  +DI ++ + I GL+E    L  + I  L  Y+ ITA  TL CAGNRR   + VR  KG  W  +A+  A+++G  +AD+++          +    +  K+V ++       G Y  SI L+ A  P   ++LA++MNGE L  DHG PLR VVPG IG RSV  W+
Sbjct:   55 TTPDSHVPRDPR--LIRLTGVHPFNVEPPLTALFQQGFLTPPELFYVRNHGPVPHVRDEDIPNWELRIEGLVEKPITLSFKQI--LQNYDQITAPITLVCAGNRRKEQNTVRKSKGFSWGSAALSTALFTGPMMADIIK----------SAKPLRRAKYVCMEGADNLPNGNYGTSIKLNWAMDPNRGIMLAHKMNGEDLRPDHGRPLRAVVPGQIGGRSVK-WL 264          
BLAST of FC923141 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32
Identity = 84/232 (36.21%), Postives = 114/232 (49.14%), Query Frame = 1
Query:   37 EEEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRS-GGKHVKFVSIDKCKEENGGPYKASIPLSQATSPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVNGWI 723
            E EAS M      ++         ++++  K PFNAE P   L+   ++TPV   Y RNHGP+P  +  E + V I GL++      M R +R  P     ATL CAGNRR   + V+   G  W  +    +VW G  +  VL   GI     +TR  G  HV F   +      G  Y  SI    A  P  D++LAY  NGEPL  DHG+P+R+++PG IG R V  W+
Sbjct:   61 ETEASVMDPRDEGTADQWVARNASMVRLTGKHPFNAESPLQRLMHHGFITPVPLHYVRNHGPVPKAN-WEDWTVEITGLVKRPTRFTMDRLVREFPHREFPATLVCAGNRRKEQNMVKKTIGFNWGSAGTSTSVWRGVPVRHVLRRCGI-----LTRGKGALHVSFEGAENLPGGGGSKYGTSISREMAMDPSRDIILAYMQNGEPLAPDHGFPIRMIIPGFIGGRMVK-WL 285          
The following BLAST results are available for this feature:
BLAST of FC923141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
SUOX_ARATH3.512e-10379.11Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=... [more]
SUOX_CHICK3.333e-5349.34Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3[more]
SUOX_RAT8.209e-5248.88Sulfite oxidase, mitochondrial OS=Rattus norvegicu... [more]
SUOX_MOUSE1.829e-5148.25Sulfite oxidase, mitochondrial OS=Mus musculus GN=... [more]
SUOX_MACFA1.548e-5047.37Sulfite oxidase, mitochondrial OS=Macaca fascicula... [more]
SUOX_HUMAN2.022e-5046.49Sulfite oxidase, mitochondrial OS=Homo sapiens GN=... [more]
SUOX_DROME2.022e-5047.93Probable sulfite oxidase, mitochondrial OS=Drosoph... [more]
NIA_ASPNG1.008e-3340.74Nitrate reductase [NADPH] OS=Aspergillus niger GN=... [more]
NIA_EMENI1.115e-3238.67Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA2_PHAVU7.225e-3236.21Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]

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Properties
Property NameValue
Genbank descriptionC31701E07EF StrClemenN Citrus clementina cDNA clone C31701E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923141 ID=FC923141; Name=FC923141; organism=Citrus clementina; type=EST; length=737bp
GAAACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCTTC
GACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCCTC
GTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGCCG
CCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTCTA
CAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTATT
ATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGAGG
GATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGTGC
GGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGTTG
GCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAATTG
GCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACTAG
GTCAGGTGGAAAACATGTTAAATTTGTAAGCATTGACAAGTGTAAGGAGG
AGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAAGC
CCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTTAA
TAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGTTATAGGTG
CTCGTTCTGTCAATGGGTGGATACCATCACATCCTTG
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