FC923148

Overview
NameFC923148
Unique NameFC923148
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:1..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.367e-47
Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFRQ 679
            FS   +   T  NKC +TVWPG L+    P LS TGF L  G +++++AP+ W G  + RT CS D++GKFTC T DCG G++ C+G+GAAPPATL E  +   GGQDFYDVSLVDG+NLP+ V PQGG G  C ++ C  D+N  CP+ L+V    GS  +ACKSAC AF Q
Sbjct:   19 FSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGS-VIACKSACLAFNQ 189          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.945e-46
Identity = 90/171 (52.63%), Postives = 111/171 (64.91%), Query Frame = 2
Query:  173 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSV-ACKSACEAFRQ 679
            V S  FT  NKC +TVWPG L+    P L +TGF L  G + +L   A W G  W R+ CS DS+GKF C TGDCG G++ C+G+GA+PPA+L E  L   GGQDFYDVSLVDG+NLP+ + P+GG G +C ST C  ++N  CP+EL     G  GSV  CKSAC A  Q
Sbjct:   20 VYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAELS--DKGSDGSVIGCKSACLALNQ 187          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.199e-44
Identity = 85/171 (49.71%), Postives = 110/171 (64.33%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            FS   +   T  N C +TVWPG L+    P LS TGF L    +++++AP+ W G  W RT CS D+ GKFTC T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N  CP+ L+V    GS  ++CKSAC AF
Sbjct:   19 FSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGS-VISCKSACLAF 187          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.457e-44
Identity = 88/171 (51.46%), Postives = 109/171 (63.74%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            F    + T +  N C + VWPG L++   P LSTTGF L    +  L+ P  W G  WART CS D++GKF C T DC  G++ C+G+GA PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G +C +  C  ++NA CPSEL+     GS  VAC SAC  F
Sbjct:   18 FGGAHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGS-VVACLSACVKF 186          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.537e-43
Identity = 93/167 (55.69%), Postives = 108/167 (64.67%), Query Frame = 2
Query:  173 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            V +T FT+ N C  TVW G L+    P L   GF L  G ++ L APA W G  WART C+ D++G   CVTGDCGG L C+G G  PP TLAEF L G GG+DFYDVSLVDGYN+ + + P GG G +C   GCV DLNAACP  LKVM    +  VACKSACE F
Sbjct:   21 VMATDFTLRNNCPTTVWAGTLAG-QGPKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQ--NNVVACKSACERF 181          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  212 HTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            +TVWPG L+    P LS T F L    +++++AP+ W G  W RT CS D+ GKF+C T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N ACP++L+V    GS  ++CKSAC AF
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGS-VISCKSACLAF 153          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.146e-40
Identity = 86/171 (50.29%), Postives = 102/171 (59.65%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            F    + T +  N C +TVWP    N   P LSTTGF L    +  L+ P  W G  WART CS D++GKF C T DC  G+L C+G    PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G  C    C  ++N  CPSEL+ +   GS  VAC SAC  F
Sbjct:   18 FGGAHAATMSFKNNCPYTVWPASFGN---PQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGS-VVACLSACVKF 183          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.661e-40
Identity = 86/169 (50.89%), Postives = 105/169 (62.13%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSV-ACKSACEAFRQ 679
            S   T  N C  T+WPG L++   P L  TGF L    + TL   A W G  WART C+ +S GKFTC T DC  G++ C+G+GA PPA+L E  +    G DFYDVSLVDGYNLPV V  +GG G +C +T C  ++NA CP+EL+V   G   SV ACKSAC AF Q
Sbjct:   22 SAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQV--KGSDASVLACKSACTAFNQ 186          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38
Identity = 81/169 (47.93%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  167 SCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            S  +++T    NKC H VWPGI  +A    L+  GF L   +  +L  P  W G  W R  C+ D +G+  C TGDCGG L C+G+G  PPATLAE  L      DFYDVSLVDGYNL + ++P  G G  C+  GCV DLN  CP  L+V +  G   VACKSAC AF
Sbjct:   16 SHASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLG--PELDFYDVSLVDGYNLAMSIMPVKGSG-QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAF 181          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.207e-36
Identity = 81/166 (48.80%), Postives = 102/166 (61.45%), Query Frame = 2
Query:  191 TMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAP-ASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDF--YDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGS-VACKSACEAFR 676
            T++N C +T+WP I  NA  P L   GF L     ++  AP A W G +WART C+    GKF C TGDCGG++EC G G A PATLA+F L  +G  DF  Y VSLVDG+N+P+ V P  G G  C   GC  +L  +CP+ L+  + GG G  V CKSACEAF+
Sbjct:   32 TLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLH-HGHADFSTYGVSLVDGFNIPLTVTPHEGKGV-CPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFK 194          
The following BLAST results are available for this feature:
BLAST of FC923148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_PRUPE2.367e-4752.60Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY9.945e-4652.63Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1A_MALDO3.199e-4449.71Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP_PRUAV5.457e-4451.46Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
PR5_ARATH3.537e-4355.69Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1B_MALDO4.324e-4150.97Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP2_PRUPE2.146e-4050.29Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA3.661e-4050.89Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ARATH2.623e-3847.93Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC3.207e-3648.80Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31701F03EF StrClemenN Citrus clementina cDNA clone C31701F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923148 ID=FC923148; Name=FC923148; organism=Citrus clementina; type=EST; length=679bp
GACTCTGCTTCCTACCTTCTCCCTCTTCTTCATTGACCTTTTTCTCTTTT
CTTTTTTTTCTTTTTTTTTTTTTATATTTTTAACATTCAGCAGCCACCAG
CCGCCAGCTCCTCCGATGGCCGCCTCTCAACTAACACTTTTACTTTTAAT
CACTCATTTAACATTTTCCTGTGTGACATCCACCACCTTCACAATGATCA
ACAAATGCGACCACACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCT
CCCGCACTCTCCACCACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGAC
CCTCAACGCACCCGCTTCGTGGGGCGGCTGCATGTGGGCCAGAACACTCT
GCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGC
GGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGC
TGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTT
TGGTCGACGGCTACAACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGAC
GGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTG
TCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAAGTGTTGCTT
GCAAGAGCGCGTGCGAAGCCTTTAGGCAG
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