FC923160

Overview
NameFC923160
Unique NameFC923160
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.282e-53
Identity = 99/184 (53.80%), Postives = 123/184 (66.85%), Query Frame = 2
Query:  173 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGG--VACKSACEAFRQPQYCCNGAFSTP 715
            V S  FT  NKC +TVWPG L+    P L +TGF L  G + +L   A W G  W R+ CS DS+GKF C TGDCG G++ C+G+GA+PPA+L E  L   GGQDFYDVSLVDG+NLP+ + P+GG G +C ST C  ++N  CP+EL   +D GS G  + CKSAC A  QPQYCC GA+ TP
Sbjct:   20 VYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAEL---SDKGSDGSVIGCKSACLALNQPQYCCTGAYGTP 199          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.240e-51
Identity = 95/178 (53.37%), Postives = 121/178 (67.98%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            FS   +   T  NKC +TVWPG L+    P LS TGF L  G +++++AP+ W G  + RT CS D++GKFTC T DCG G++ C+G+GAAPPATL E  +   GGQDFYDVSLVDG+NLP+ V PQGG G  C ++ C  D+N  CP+ L+V    GS  +ACKSAC AF QP+YCC
Sbjct:   19 FSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGS-VIACKSACLAFNQPKYCC 194          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.427e-48
Identity = 95/185 (51.35%), Postives = 117/185 (63.24%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            F    + T +  N C + VWPG L++   P LSTTGF L    +  L+ P  W G  WART CS D++GKF C T DC  G++ C+G+GA PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G +C +  C  ++NA CPSEL+     GS  VAC SAC  F  PQYCC    +TP
Sbjct:   18 FGGAHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGS-VVACLSACVKFGTPQYCCTPPQNTP 200          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.249e-48
Identity = 100/181 (55.25%), Postives = 115/181 (63.54%), Query Frame = 2
Query:  173 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            V +T FT+ N C  TVW G L+    P L   GF L  G ++ L APA W G  WART C+ D++G   CVTGDCGG L C+G G  PP TLAEF L G GG+DFYDVSLVDGYN+ + + P GG G +C   GCV DLNAACP  LKVM    +  VACKSACE F   QYCC GA   P
Sbjct:   21 VMATDFTLRNNCPTTVWAGTLAG-QGPKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQ--NNVVACKSACERFNTDQYCCRGANDKP 195          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 90/185 (48.65%), Postives = 117/185 (63.24%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            FS   +   T  N C +TVWPG L+    P LS TGF L    +++++AP+ W G  W RT CS D+ GKFTC T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N  CP+ L+V    GS  ++CKSAC AF   +YCC    +TP
Sbjct:   19 FSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGS-VISCKSACLAFGDSKYCCTPPNNTP 201          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.336e-46
Identity = 93/179 (51.96%), Postives = 113/179 (63.13%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFST 712
            S   T  N C  T+WPG L++   P L  TGF L    + TL   A W G  WART C+ +S GKFTC T DC  G++ C+G+GA PPA+L E  +    G DFYDVSLVDGYNLPV V  +GG G +C +T C  ++NA CP+EL+V     S  +ACKSAC AF QPQYCC GAF T
Sbjct:   22 SAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDAS-VLACKSACTAFNQPQYCCTGAFDT 197          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44
Identity = 89/183 (48.63%), Postives = 107/183 (58.47%), Query Frame = 2
Query:  167 SCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            S  +++T    NKC H VWPGI  +A    L+  GF L   +  +L  P  W G  W R  C+ D +G+  C TGDCGG L C+G+G  PPATLAE  L      DFYDVSLVDGYNL + ++P  G G  C+  GCV DLN  CP  L+V +  G   VACKSAC AF  PQYCC G F  P
Sbjct:   16 SHASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLG--PELDFYDVSLVDGYNLAMSIMPVKGSG-QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNP 195          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44
Identity = 91/178 (51.12%), Postives = 108/178 (60.67%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCC 694
            F    + T +  N C +TVWP    N   P LSTTGF L    +  L+ P  W G  WART CS D++GKF C T DC  G+L C+G    PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G  C    C  ++N  CPSEL+ +   GS  VAC SAC  F +PQYCC
Sbjct:   18 FGGAHAATMSFKNNCPYTVWPASFGN---PQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGS-VVACLSACVKFGEPQYCC 190          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.785e-44
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 2
Query:  212 HTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTP 715
            +TVWPG L+    P LS T F L    +++++AP+ W G  W RT CS D+ GKF+C T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N ACP++L+V    GS  ++CKSAC AF   +YCC     TP
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGS-VISCKSACLAFGDSKYCCTPPNDTP 167          
BLAST of FC923160 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.270e-40
Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 2
Query:  191 TMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAP-ASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDF--YDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGG-VACKSACEAFRQPQYCCNGAFSTP 715
            T++N C +T+WP I  NA  P L   GF L     ++  AP A W G +WART C+    GKF C TGDCGG++EC G G A PATLA+F L  +G  DF  Y VSLVDG+N+P+ V P  G G  C   GC  +L  +CP+ L+  + GG G  V CKSACEAF+  ++CC   +++P
Sbjct:   32 TLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLH-HGHADFSTYGVSLVDGFNIPLTVTPHEGKGV-CPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSP 207          
The following BLAST results are available for this feature:
BLAST of FC923160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_PYRPY3.282e-5353.80Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP1_PRUPE5.240e-5153.37Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV1.427e-4851.35Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
PR5_ARATH9.249e-4855.25Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1A_MALDO1.578e-4748.65Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_CASSA1.336e-4651.96Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ARATH1.633e-4448.63Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLP2_PRUPE1.633e-4451.12Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TP1B_MALDO2.785e-4449.70Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
OLP1_SOLLC9.270e-4046.93Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31701G03EF StrClemenN Citrus clementina cDNA clone C31701G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923160 ID=FC923160; Name=FC923160; organism=Citrus clementina; type=EST; length=732bp
GACTCTGCTTCCTACCTTCTCCCTCTTCTTCATTGACCTTTTTCTCTTTT
CTTTTTTTTCTTTTTTTTTTTTTATATTTTTAACATTCAGCAGCCACCAG
CCGCCAGCTCCTCCGATGGCCGCCTCTCAACTAACACTTTTACTTTTAAT
CACTCATTTAACATTTTCCTGTGTGACATCCACCACCTTCACAATGATCA
ACAAATGCGACCACACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCT
CCCGCACTCTCCACCACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGAC
CCTCAACGCACCCGCTTCGTGGGGCGGCTGCATGTGGGCCAGAACACTCT
GCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGC
GGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGC
TGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTT
TGGTCGACGGCTACAACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGAC
GGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTG
TCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAGGTGTTGCTT
GCAAGAGCGCGTGCGAAGCCTTTAGGCAGCCGCAGTACTGTTGTAATGGC
GCGTTTAGTACTCCGATACATGCAAGCCATCT
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