FC923289

Overview
NameFC923289
Unique NameFC923289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GTA_ARATH (Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.898e-66
Identity = 117/166 (70.48%), Postives = 130/166 (78.31%), Query Frame = 1
Query:    4 ENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSSINRDKVCSM 501
            ENR TKDFLILE HEEAQEELPKK KFF+S AVQ WDAEFYVKV                  R Q+ AYIGCMKSGDV+TEEG QWYEPEWWKFGD KSYFRHA GS+ +LS+NLAQY+NINS  LKTYA DDT++GSWM+GV+ATY DDNR CCSS  ++KVCSM
Sbjct:  179 ENRATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEEGSQWYEPEWWKFGDDKSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTTIGSWMIGVQATYIDDNRLCCSSTRQEKVCSM 344          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT9_ARATH (Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.740e-65
Identity = 116/166 (69.88%), Postives = 131/166 (78.92%), Query Frame = 1
Query:    4 ENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSSINRDKVCSM 501
            EN+  KDFLILE HEEAQEEL KK KFFFS AVQ WDAEFY+KV                  RGQ++AYIGCMKSG+VV EEG +WYEPEWWKFGD KSYFRHAAGS+ +LS+ LAQY+NINS SLKTYA DDTS+GSWM+GV+ATY DDNR CCSSI +DKVCS+
Sbjct:  180 ENQARKDFLILENHEEAQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIGLLESRRGQDAAYIGCMKSGEVVAEEGGKWYEPEWWKFGDEKSYFRHAAGSLLILSKTLAQYVNINSGSLKTYAFDDTSIGSWMIGVQATYIDDNRLCCSSIRQDKVCSV 345          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GTB_ARATH (Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 1
Query:    4 ENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGDGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSSINRDKVCS 498
            EN +T DF+IL+   EA EE  KK K FF+ A   WDA+FY K                        AYIGCMKSG+V +E   +WYEPEWWKFGD K+YFRHA G ++V++  LA++++IN   L +YAHDD S GSW +G+   + D+ +FCCS+ + + +C+
Sbjct:  172 ENSQTDDFIILDDVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEWWKFGDKKAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEGKFCCSAWSSEAICA 336          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35
Identity = 72/159 (45.28%), Postives = 101/159 (63.52%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            AE+R+  DFL L+ H E   EL  K K +FSTA  +WDA+FYVKV                R R +   YIGCMKSG V++++G +++EPE+WKFG+ G  YFRHA G ++ +SR+LA YI+IN   L  YA++D S+G+W +G+   + DD R CC +
Sbjct:  199 AEDRKHGDFLRLD-HVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGT 356          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            AE+++  DFL L+ H E   EL  K K +FSTAV  WDAEFYVKV                R R +   Y+GCMKSG V++++G +++EPE+WKFG+ G  YFRHA G ++ +SR+LA YI++N   L  YA++D ++G+W +G+  T+ DD R CC +
Sbjct:  201 AEDKKHGDFLRLD-HVEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDRRLCCGT 358          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.467e-34
Identity = 75/165 (45.45%), Postives = 98/165 (59.39%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEE------GRQWYEPEWWKFG-DGKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            +E+ + KDFL LE H E   EL  K K FFSTAV  WDAEFY+KV                R R +   YIGCMKSG V+ +         +++EPE+WKFG DG  YFRHA G I+ +S++LA YI+IN   L  YA++D S+GSW +G+   + DD  FCC +
Sbjct:  179 SEDAQHKDFLRLE-HVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGT 342          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT6_ARATH (Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33
Identity = 68/159 (42.77%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            AE  + KDF  L  H E   EL  K + +FS+AV  WDA+FY+KV                R R +   YIGCMKSG V+ ++G +++EPE+WKFG+ G  YFRHA G I+ +S++LA YI++N   L  YA++D S+GSW +G+   + DD   CC +
Sbjct:  191 AEEEQHKDFFRLN-HIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGT 348          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT4_ARATH (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            AE  +  DFL L+ H E   EL  K K +F+TA  +WDA+FYVKV                R R +   YIGCMKSG V+ ++G +++EPE+WKFG+ G  YFRHA G ++ +SR LA YI+IN   L  Y ++D S+GSW +G+   + DD R CC +
Sbjct:  200 AEESKHGDFLRLD-HVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCGT 357          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT8_ARATH (Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32
Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 1
Query:    4 ENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            E+ E KDFL L+ H E   +L  K + +FSTA  ++DAEFYVKV                R + +   YIGCMKSG V++++G +++EPE+WKFG+ G  YFRHA G I+ +S++LA YI+ N   L  YA++D S+G+WM+G+   + D+   CC +
Sbjct:  186 EDSEHKDFLRLK-HIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVHVNLGMLVTTLARYQSRPRIYIGCMKSGPVLSQKGVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISTNQGILHRYANEDVSLGAWMLGLEVEHVDERSMCCGT 342          
BLAST of FC923289 vs. ExPASy Swiss-Prot
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32
Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 AENRETKDFLILEGHEEAQEELPKKAKFFFSTAVQIWDAEFYVKVXXXXXXXXXXXXXXXXRSRGQESAYIGCMKSGDVVTEEGRQWYEPEWWKFGD-GKSYFRHAAGSIFVLSRNLAQYININSASLKTYAHDDTSVGSWMMGVRATYKDDNRFCCSS 474
            AE +   DFL LE H E   +L  K K FF+TAV +WDAEFY+KV                  + +   Y+GCMKSG V+  +  +++EPE+WKFG+ G  YFRHA G  + +S++LA YI IN   L  YA++D S+GSW +G+   + D+ R CCS+
Sbjct:  176 AEEKTHGDFLRLE-HTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEKRLCCST 333          
The following BLAST results are available for this feature:
BLAST of FC923289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
B3GTA_ARATH1.898e-6670.48Probable beta-1,3-galactosyltransferase 10 OS=Arab... [more]
B3GT9_ARATH2.740e-6569.88Probable beta-1,3-galactosyltransferase 9 OS=Arabi... [more]
B3GTB_ARATH2.336e-4044.85Probable beta-1,3-galactosyltransferase 11 OS=Arab... [more]
B3GT2_ARATH5.040e-3545.28Probable beta-1,3-galactosyltransferase 2 OS=Arabi... [more]
B3GT3_ARATH6.583e-3544.65Probable beta-1,3-galactosyltransferase 3 OS=Arabi... [more]
B3GT7_ARATH1.467e-3445.45Beta-1,3-galactosyltransferase 7 OS=Arabidopsis th... [more]
B3GT6_ARATH2.118e-3342.77Probable beta-1,3-galactosyltransferase 6 OS=Arabi... [more]
B3GT4_ARATH2.766e-3344.03Probable beta-1,3-galactosyltransferase 4 OS=Arabi... [more]
B3GT8_ARATH1.051e-3242.41Probable beta-1,3-galactosyltransferase 8 OS=Arabi... [more]
B3GT1_ARATH1.051e-3242.77Probable beta-1,3-galactosyltransferase 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC31703C03EF StrClemenN Citrus clementina cDNA clone C31703C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923289 ID=FC923289; Name=FC923289; organism=Citrus clementina; type=EST; length=709bp
GCAGAAAATCGTGAGACGAAGGATTTCCTGATTCTTGAAGGTCATGAGGA
GGCTCAAGAAGAACTTCCTAAGAAAGCAAAATTCTTCTTCAGTACTGCGG
TTCAAATTTGGGATGCAGAATTCTATGTAAAAGTTGATGACAATATTGAC
CTCGATTTGGAGGGACTGATTGGACTTCTTGATCGTAGTCGTGGTCAAGA
GAGTGCTTATATTGGATGCATGAAGTCAGGAGATGTTGTAACTGAAGAGG
GAAGGCAATGGTATGAACCTGAATGGTGGAAGTTTGGGGATGGGAAATCG
TATTTCCGACATGCAGCTGGTTCAATTTTTGTTCTCTCCAGAAATTTGGC
TCAGTATATCAACATAAACAGTGCATCTCTGAAGACTTATGCTCACGATG
ATACATCTGTTGGGTCCTGGATGATGGGTGTCCGAGCAACCTACAAAGAT
GATAATCGTTTTTGCTGCAGCAGCATTAACCGAGATAAGGTTTGTTCCAT
GTTTTGATCAAAGGAACAGCTTCTCCAATCAGGATGCAGGCCCCTTTCTG
GGTTGTTGATGCCATTGAACAGCATTGTTTTTGCAGCCAGTCACGCACAC
ATCTATTGCATATTATGGTGCGGCTTTTGTGAAGTAGCATTGGATCATTC
TTTTCAGATGTAGAGATTGATNAGCAATTATTTTTTAGGAAAATCAAGGC
TAATCTAAC
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