FC923469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 4.612e-97 Identity = 177/237 (74.68%), Postives = 196/237 (82.70%), Query Frame = 2 Query: 5 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPS---GVDNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 DP SE+Y+KL A + KC S+RSLSGFLE P CLSA HP+C NLTSLNLSYA IHG+ LIKLI+ C+KL+RLWILDSIGD+GL VVA TCKELQELRVFPS G N AVTEEGLVAISAGCPKLHS+LYFCQQMTNAAL+TVAKN NF RFRLCIL+ KPD VT QPLDEGFGAIV++CK TDQVFLYIGMYA QLEMLSIAFAG++DKGMLYVLNGCKK++ Sbjct: 243 DPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMK 479
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 2.895e-91 Identity = 169/239 (70.71%), Postives = 191/239 (79.92%), Query Frame = 2 Query: 5 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV-----DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 +P E++ KL + K S+RSLSGFLEV P CL A +P+CQNL SLNLSYA I GN LIKLI+ C++L+RLWILDSIGD+GL VVA TCKELQELRVFPS V +NA+VTE GLVAISAGCPKLHS+LYFC+QMTNAALI VAKN NF RFRLCIL+ KPD +T Q LDEGFGAIVQ+CK TDQVFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKK+R Sbjct: 243 EPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMR 481
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.190e-82 Identity = 153/237 (64.56%), Postives = 182/237 (76.79%), Query Frame = 2 Query: 5 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSG---VDNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 D +E+Y KL + L KCK +RSLSGF + P CLS I+P+C LT LNLSYAP + ++L K+I C KL+RLW+LD I D+GL VVA +CK+LQELRVFPS +AVTEEGLVA+S GCPKL+SLLYFC QMTNAAL+TVAKN NFTRFRLCIL+ KPD VT QPLDEGFGAIV+ CK TD+VF+YIG YA+QLEMLSIAFAG+SDKGM++V+NGCK LR Sbjct: 243 DFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPLCAQLTGLNLSYAPTLDASDLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLR 479
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.805e-70 Identity = 138/231 (59.74%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 20 AYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA--VTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 AY L + C ++SLSGF + + I PVC+NLT LNLS AP + LI+ I C+KL++LW+LD IGD GL +VA +C +LQELRVFP+ + A VTEEGLVAISAGC KL S+LYFCQ+MTN+ALITVAKN FT FRLC+LD D VT QPLDEG+GAIVQSCK TD VFLYIGMYAE+LEMLS+AFAG++D GM YVLNGCK L+ Sbjct: 243 AYAGLFNSFQHCSLLKSLSGFWDATSLFIPVIAPVCKNLTCLNLSSAPMVRSAYLIEFICQCKKLQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLK 473
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 1.002e-67 Identity = 130/234 (55.56%), Postives = 168/234 (71.79%), Query Frame = 2 Query: 17 EAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV----DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 + Y L L CK +R LSGF + VP L A++ VC LT+LNLSYA + +L+KL+ C KL+RLW+LD I D GL V+A TCK+L+ELRVFPS N A+TE+GLV++S GCPKL S+LYFC+QMTNAALIT+A+N N TRFRLCI++ + PD +T++PLD GFGAIV+ CK TD+VF YIG YA+++EMLS+AFAG+SD GM +VL+GC LR Sbjct: 252 DVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT-VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLR 484
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.729e-65 Identity = 131/235 (55.74%), Postives = 163/235 (69.36%), Query Frame = 2 Query: 5 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVDNAA-VTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 D S+ + KL+A CKS+R LSG + VP L A + VC+ LTSLNLSYA + G ELIK I CR L++LW++D I D GL VVA +C +LQELRVFPS A +TE GLV +SA CP L S+LYFC++MTN ALIT+AKN NFT FRLCIL+ PD +T +PLD GF AIV+SC+ TD VF IG +A++LEMLSIAFAGNSD G+ Y+L+GCK L+ Sbjct: 262 DYHSDLFAKLEAAFGGCKSLRRLSGAWDAVPDYLPAFYCVCEGLTSLNLSYAT-VRGPELIKFISRCRNLQQLWVMDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLK 495
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.737e-56 Identity = 119/237 (50.21%), Postives = 150/237 (63.29%), Query Frame = 2 Query: 5 DPSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV---DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 +P SE A CKS+ LSGF E++P L AI PVC NLTSLN SYA I + +I C KL+ W LDSI D GL VA TCKEL+ELR+FP V+E GL AIS GC KL S+LYFCQ+MTNAA+I +++N T FRLCI+ R +PD VT +P+DEGFGAIV++CK TDQ F Y+G Y + + LS+AFAG+SD + +VL GC +L+ Sbjct: 295 EPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYA-NISPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQ 530
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.798e-56 Identity = 112/234 (47.86%), Postives = 156/234 (66.67%), Query Frame = 2 Query: 17 EAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD----NAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 EA+ KL CK ++SLSG +V+P L A++ VC LTSLNLSYA + +L++L+R C KL++LW++D I D+GL VA CKEL+ELRVFPS D N +TE+GLV +S GC KL S+LYFC Q TNAAL T+A+ N FRLC+++ PD T +PLD+GF AI + C+ +D+ F YIG +A+++ MLSIAFAG+SD + ++L+GC+ L+ Sbjct: 248 EAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYAT-VRMPDLVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLK 480
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.835e-53 Identity = 117/236 (49.58%), Postives = 141/236 (59.75%), Query Frame = 2 Query: 8 PSSEAYIKLKATLVKCKSIRSLSGFLEVVPCCLSAIHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGV---DNAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 P E A CKSI LSGF E P L AI VC NLTSLN SYA I + L +I C + W LDSI D GL VA TCKEL+ELR+FP V+ GL AIS GC KL S+LYFCQ MTN A+ +++N T FRLCI+ R +PD VT +P+D+GFGAIV++CK TD+ F YIG Y + + LS+AFAGNSDK + YVL GC KL+ Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYA-NISPHMLKPIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQ 530
BLAST of FC923469 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19 Identity = 64/208 (30.77%), Postives = 102/208 (49.04%), Query Frame = 2 Query: 113 IHPVCQNLTSLNLSYAPGIHGNELIKLIRFCRKLERLWILDSIGDRGLGVVAFTCKELQELRVFPSGVD-------NAAVTEEGLVAISAGCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCK---XXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLR 706 + P + L+L YA + + LI+ C LE L + IGDRGL V+A CK+L+ LR+ G D V++ GL+A++ GC +L + + +TN +L ++ N FRL +LDRE + +T PLD G +++ CK TD YIG Y+ + + + + G SD+G++ GC L+ Sbjct: 288 LFPFAAQIRKLDLLYAL-LETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRI-ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQ 491 The following BLAST results are available for this feature:
BLAST of FC923469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923469 ID=FC923469; Name=FC923469; organism=Citrus clementina; type=EST; length=714bpback to top |