FC923474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.958e-62 Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 1 Query: 256 PNPSSNIDAHKLSHTFRPIGSRKPRKLVSIQKNLRNSSVRAVYSGKFWAPDRSYRQGIWSIRDDLQIPSSPYFPVHAQGPPPANPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 PN SS D+ KLS F P+ SRK KLVS +KN +NS+ +AVYSG W P+ QG+WSIRDDLQ+PSSPYFP +AQG P PMVQERFQS+ISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDA+DP KDIV+YVNSPGGSVTAGMAIFDTM+HIRPD Sbjct: 24 PNGSS-FDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPP-PMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD 182
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTMKHIRPD Sbjct: 14 ERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPD 86
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RI+ G VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTMKHIRPD Sbjct: 14 ERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPD 86
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+DTM+HI+PD Sbjct: 13 ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPD 85
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+DTM+HI+PD Sbjct: 13 ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPD 85
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP_PASMU (ATP-dependent Clp protease proteolytic subunit OS=Pasteurella multocida GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 45/73 (61.64%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + R+I GG V+D MAN+IVAQLL+L++ DP KDI IY+NSPGGSVTAGMAI+DTM+ ++PD Sbjct: 15 ERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGMAIYDTMQFVKPD 87
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19 Identity = 43/73 (58.90%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G A+DD +AN+++AQ+L+L+A DP KDI +Y+NSPGGS++AGMAIFDTM++IRPD Sbjct: 16 ERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPD 88
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G A+DD++AN IV+QLL+L A D KDI +Y+NSPGGSVTAGMAI+DTM+HI+PD Sbjct: 15 ERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPD 87
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19 Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L Q RI+ G +DD +AN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAG+AI+DTM++I+PD Sbjct: 22 ERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGSVTAGLAIYDTMQYIKPD 94
BLAST of FC923474 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19 Identity = 42/73 (57.53%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 520 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD 738 ER + S+L + RII G +DD +AN+++AQLL+L+A DP KDI +Y+NSPGGS+TAGMAI+DT+++IRPD Sbjct: 16 ERSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPD 88 The following BLAST results are available for this feature:
BLAST of FC923474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923474 ID=FC923474; Name=FC923474; organism=Citrus clementina; type=EST; length=739bpback to top |