FC923478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_DANRE (Maspardin OS=Danio rerio GN=spg21 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.489e-24 Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 398 W W PSF+LK+ VL GP +P +AD++DF+V ++E+L++ +LASRLTL + V + D +TIMD D A SQ+ K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HLR+ Sbjct: 147 WTANSFWLMPSFMLKKIVLGNFAKGPVDPKMADAIDFMVDRLESLNQSELASRLTLNCQNSYVEPHKIKDIAVTIMDVFDQSALSQEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYIQIHLRQ 275
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_BOVIN (Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.752e-23 Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 392 W W PSF+LK+ VL GP +P +AD++DF+V ++E+L + +LASRLTL + V + D +TIMD D A S + K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HL Sbjct: 147 WTASSFWLMPSFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHL 273
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_XENLA (Maspardin OS=Xenopus laevis GN=spg21 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23 Identity = 54/129 (41.86%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 398 W W P+F+LK+ +L GP +P +AD++DF+V ++E+L++ +LASRLTL A V + D+ +TIMD D A S K+++ + Y AR+A++KTGG FP+L R EV+L++Q+HLR+ Sbjct: 147 WTANSFWLMPAFMLKKILLGNFSSGPVDPVMADAIDFMVDRLESLNQSELASRLTLNCQNAYVEPHKIRDTAVTIMDVFDQSALSMDAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVSLYVQIHLRQ 275
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_MOUSE (Maspardin OS=Mus musculus GN=Spg21 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 392 W W P+F+LK+ VL GP +P +AD++DF+V ++E+L + +LASRLTL + V + D +TIMD D A S + K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HL Sbjct: 147 WTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHL 273
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_MACFA (Maspardin OS=Macaca fascicularis GN=SPG21 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 392 W W P+F+LK+ VL GP +P +AD++DF+V ++E+L + +LASRLTL + V + D +TIMD D A S + K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HL Sbjct: 147 WTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHL 273
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_HUMAN (Maspardin OS=Homo sapiens GN=SPG21 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 54/127 (42.52%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 392 W W P+F+LK+ VL GP +P +AD++DF+V ++E+L + +LASRLTL + V + D +TIMD D A S + K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HL Sbjct: 147 WTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHL 273
BLAST of FC923478 vs. ExPASy Swiss-Prot
Match: SPG21_PONAB (Maspardin OS=Pongo abelii GN=SPG21 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22 Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 15 WAPIVSWT-PSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 392 W W P+F+LK+ VL GP +P +AD++DF+V ++E+L + +LASRLTL + V + D +TIMD A S + K+++ + Y AR+A++KTGG FP+L R EVNL++Q+HL Sbjct: 147 WTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFGQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHL 273 The following BLAST results are available for this feature:
BLAST of FC923478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923478 ID=FC923478; Name=FC923478; organism=Citrus clementina; type=EST; length=738bpback to top |