FC923938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.706e-67 Identity = 126/209 (60.29%), Postives = 144/209 (68.90%), Query Frame = 2 Query: 95 MAGRYDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MA RYD NPF +EEEVNPF+ N+ VPPA+NSRLSPLP EP GF++ R I + +RREQD++RKE+AAARAGIV+E KNWPPFFP+IHHDIANEIP+HLQRLQYV F TYLGL +CL WNI+AVTTAWIKGEGV IW LA+IYFIAGVPG Y LWYRPLYRAFRT+ Sbjct: 1 MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTD 187
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 125/208 (60.10%), Postives = 141/208 (67.79%), Query Frame = 2 Query: 95 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAGRYD NPFDEE+VNPFS+P S ATNSR +PL + A +N+ +DIP R+REQ+VRRKEEA ARAGIV+EEKNWPPFFPIIHHDI NEIPIHL+ LQYVAF + LGL +CL WN+V+VT AWIKGEGVKIWFLAIIYFIAGVPGAY LWYRPLYRAFRT+ Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPR----------------------SAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTD 186
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.314e-64 Identity = 121/208 (58.17%), Postives = 140/208 (67.31%), Query Frame = 2 Query: 95 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAGRYD NPFDE++VNPF+ SVPPA+NSR+ PLPHEP GF +R A +DIP +RE ++RR+EEAA+RAGIV+EEKNWPPFFPIIHHDI+NEIPIHLQR+QY+AF + LGL CL WNI+A T AWIKG GV IW LAIIYFI+GVPGAY LWYRPLY A RTE Sbjct: 1 MAGRYDRNPFDEDDVNPFA-----------------------GGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTE 184
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.637e-63 Identity = 120/209 (57.42%), Postives = 145/209 (69.38%), Query Frame = 2 Query: 95 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAGRYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAF ++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAY LWYRPLY A RT+ Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTD 204
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.637e-63 Identity = 120/209 (57.42%), Postives = 145/209 (69.38%), Query Frame = 2 Query: 95 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAGRYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAF ++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAY LWYRPLY A RT+ Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSMSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTD 204
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 3.444e-63 Identity = 123/211 (58.29%), Postives = 143/211 (67.77%), Query Frame = 2 Query: 95 MAGRYDSNPFDEE-EVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFER--DAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 M GRYD N FDE+ EVNPF++P SVP A+NSRLSPLP EPAGF + R D P+D P RRREQD++RK++AAARAGIV+E KNWP FFP+IHHDIANEI + LQRLQY+AF TYLGL + L WNI+AVTTAWIKGEGV IW LA+IYFI+GVPG Y LWYRPLYRAFR++ Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPG----------------------SVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSD 189
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 123/214 (57.48%), Postives = 142/214 (66.36%), Query Frame = 2 Query: 95 MAGR--YDSNPFDE---EEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSA-SVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAGR YD NPF+E +EVNPF+D A + TT S S PPAT+ LSPLP EPA F + P+DIP RRE++++R+EEAAARAGIVLE+KNWPPFFPIIH+DI NEIP+HLQR QYVAF + LGL +CL WNI+ VT AWIKGEG KIWFLA+IYFI G PGAY LWYRPLYRA R E Sbjct: 1 MAGRSRYD-NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATH--LSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNE 211
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.089e-60 Identity = 118/205 (57.56%), Postives = 141/205 (68.78%), Query Frame = 2 Query: 104 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 RY S+ FD+ E+NPF++P SVP AT S+LSPLP EP ++R A +DIP +RREQ+++RKE+A A+AGIV+EEKNWPPFFP+IHHDI+NEIPIHLQR+QYVAF + LGL VCLLWNIVAVTTAWIKGEG IWFLAIIYFI+GVPGAY +WYRPLYRA RT+ Sbjct: 3 RYQSHSFDDGEINPFANPT----------------------SVPAAT-SKLSPLPPEP----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTD 180
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.956e-58 Identity = 112/205 (54.63%), Postives = 135/205 (65.85%), Query Frame = 2 Query: 104 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 R+D NPF +EE+NPF+ N SVPPA+NS L PLP EP ++R A +DIP +R+EQ+++R+E+A AR G+V+EEKNWP FFP+IHHDI NEIPIHLQ++QYVAF T LGL CLLWNIVAVT AWIKGEG IW L+IIYF+AGVPGAY LWYRPLYRA RT+ Sbjct: 3 RHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEP----YDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTD 181
BLAST of FC923938 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.357e-58 Identity = 111/208 (53.37%), Postives = 137/208 (65.87%), Query Frame = 2 Query: 95 MAGRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFVTYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTE 718 MAG++ N F++++VNPF+ SVPPA NSRL PL HEPA F +DIP +RE++++RKEEAAA+AGIV+E+KNWPPFFP+IHH+I+NEIPIHLQR+QY+AF ++LGL CL WNI+A TTAW+KGEGV IW LAIIYFI+GVPGAY LWYRPLY A RTE Sbjct: 1 MAGKHGRNGFEDDDVNPFA-----------------------GGSVPPANNSRLPPLSHEPADFY-----NVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTE 180 The following BLAST results are available for this feature:
BLAST of FC923938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923938 ID=FC923938; Name=FC923938; organism=Citrus clementina; type=EST; length=726bpback to top |