FC923949

Overview
NameFC923949
Unique NameFC923949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2823 contig Ccv1_Contig2823:106..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 382.489 bits (981), Expect = 8.971e-106
Identity = 179/201 (89.05%), Postives = 189/201 (94.03%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETC KIKALHQYDCLRANK+TSAWGLEARVPFLDK+F+N+AM+IDPE KMI P +GRIEKWILRKAFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKM+ NA +IFPHNTP TKE YYYRMIFERFFPQNSA+LTVPGG SVACST  AV WD
Sbjct:  332 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNLAMSIDPEAKMIKPDQGRIEKWILRKAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACSTATAVAWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 1.212e-102
Identity = 172/201 (85.57%), Postives = 190/201 (94.53%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMV+SGEGSDEIFGGYLYFHKAPNK+EFH+ETC KIKALH+YDCLRANK+TSA+GLEARVPFLDK+FIN AM++DPE KMI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA ++V DKM+  A +IFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGA+VACST  AVEWD
Sbjct:  333 KSLGVKMVLSGEGSDEIFGGYLYFHKAPNKQEFHQETCRKIKALHKYDCLRANKATSAFGLEARVPFLDKEFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWD 533          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 370.933 bits (951), Expect = 2.701e-102
Identity = 173/201 (86.07%), Postives = 189/201 (94.03%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMV+SGEG+DEIFGGYLYFHKAPNK+EFH+ETC KIKALH+YDCLRANKSTSA+GLEARVPFLDKDFIN AM++DPE KMI P+EGRIEKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V DKM+ NA +IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGGA+VACST  AVEWD
Sbjct:  332 KSLGVKMVLSGEGADEIFGGYLYFHKAPNKKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 4.607e-102
Identity = 172/201 (85.57%), Postives = 185/201 (92.04%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDCLRANK+TSAWGLEARVPFLDK+F++VAM+IDPE KMI P  GRIEKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTD+M+ NA  I+PHNTP TKEAYYYRMIFERFFPQNSAR TVPGG S+ACST  A+EWD
Sbjct:  332 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHHETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFMDVAMSIDPESKMIKPDLGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQNSARFTVPGGPSIACSTAKAIEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 6.653e-101
Identity = 175/201 (87.06%), Postives = 184/201 (91.54%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVK VISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDCLRANKST AWGLEARVPFLDK+FINVAM IDPE+KMI   EGRIEK+ILR+AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HVTDKM+ NA  IF HNTPLTKEAYYYRMIFERFFPQNSARLTVPGG +VACST  AVEWD
Sbjct:  332 KSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHTETCRKIKALHQYDCLRANKSTFAWGLEARVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKYILRRAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 363.229 bits (931), Expect = 5.632e-100
Identity = 176/201 (87.56%), Postives = 181/201 (90.05%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVK VISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDC RANKST AWGLEARVPFLDK FINVAM IDPE KMI   EGRIEK+ILRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTDKM+ NA  IFPHNTP TKEAYYYRMIFERFFPQNSARLTVPGG +VACST  AVEWD
Sbjct:  332 KSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHEETCRKIKALHQYDCQRANKSTYAWGLEARVPFLDKAFINVAMNIDPENKMIKRDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 360.533 bits (924), Expect = 3.651e-99
Identity = 170/201 (84.58%), Postives = 181/201 (90.05%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KS GVK VISGEGSDEIFGGYLYFHKAPN+EEFH+ETC KIKALH+YDCLRANKST AWGLEARVPFLDKDFI VAM IDPE+KMI   EGRIEKWILRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDG+K HA +HVTD+M+ NA +IFP NTP TKEAYYYRMIFERFFPQNSARLTVPGG SVACST  A+EWD
Sbjct:  333 KSSGVKWVISGEGSDEIFGGYLYFHKAPNREEFHQETCRKIKALHRYDCLRANKSTYAWGLEARVPFLDKDFIKVAMDIDPEFKMIKHDEGRIEKWILRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTEKAIEWD 533          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 360.147 bits (923), Expect = 4.768e-99
Identity = 165/201 (82.09%), Postives = 182/201 (90.55%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMV+SGEGSDEIFGGYLYFHKAPNK+EFH ETC KIKALH YDCLRANKSTSAWG+EARVPFLDK+FINVAM IDPEWKMI    GRIEKW+LR AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HV+D M+ NA +++P NTP+TKEAYYYR IFE+FFP+N+ARLTVPGG SVACST  AVEWD
Sbjct:  332 KSLGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPGGPSVACSTAKAVEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 356.295 bits (913), Expect = 6.885e-98
Identity = 168/201 (83.58%), Postives = 180/201 (89.55%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTX*AVEWD 603
            KSLGVKMV+SGEGSDEIF GYLYFHKAPNKEE H+ETC KIKALH+YDCLRANKST AWGLEARVPFLDK FI+VAM IDPE KMI   EGRIEKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDGLK HA +HVTDKM+ NA  I+P NTP TKEAYYYRMIFERFFPQNSARL+VPGGAS+ACST  A+EWD
Sbjct:  332 KSLGVKMVLSGEGSDEIFAGYLYFHKAPNKEELHQETCSKIKALHKYDCLRANKSTYAWGLEARVPFLDKKFIDVAMGIDPENKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQNSARLSVPGGASIACSTEKAIEWD 532          
BLAST of FC923949 vs. ExPASy Swiss-Prot
Match: ASNS_SANAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3)

HSP 1 Score: 339.732 bits (870), Expect = 6.668e-93
Identity = 156/177 (88.14%), Postives = 166/177 (93.79%), Query Frame = 1
Query:    1 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKSTSAWGLEARVPFLDKDFINVAMAIDPEWKMINPQEGRIEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMVQNAQYIFPHNTPLTKEAYYYRMIFERFFPQ 531
            KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEE H ETCHKIKALHQYDCLRANK+TSAWGLEARVPFLDK+F+NVAM+IDPEWKMI P  GRIEKWILR+AFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAH+  HVTDKM+ NA +I+PHNTP TKEAYYYRMIFERFFPQ
Sbjct:  332 KSLGVKMVISGEGSDEIFGGYLYFHKAPNKEELHLETCHKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNVAMSIDPEWKMIKPDIGRIEKWILRRAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 508          
The following BLAST results are available for this feature:
BLAST of FC923949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_TRIVS8.971e-10689.05Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
ASNS_BRAOL1.212e-10285.57Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_ARATH2.701e-10286.07Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_ASPOF4.607e-10285.57Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS1_LOTJA6.653e-10187.06Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS2_PEA5.632e-10087.56Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS1_PEA3.651e-9984.58Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS_ORYSJ4.768e-9982.09Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
ASNS2_LOTJA6.885e-9883.58Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_SANAU6.668e-9388.14Asparagine synthetase [glutamine-hydrolyzing] OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC31710H02EF StrClemenN Citrus clementina cDNA clone C31710H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923949 ID=FC923949; Name=FC923949; organism=Citrus clementina; type=EST; length=605bp
AAATCTCTAGGAGTGAAGATGGTGATATCGGGTGAGGGATCTGATGAGAT
TTTTGGTGGCTATTTGTACTTCCACAAGGCACCCAATAAGGAAGAATTCC
ACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCAGTATGATTGCTTG
AGAGCTAACAAATCAACATCTGCTTGGGGTCTAGAAGCACGAGTCCCCTT
CCTTGACAAAGATTTTATTAATGTAGCAATGGCCATTGATCCTGAGTGGA
AGATGATTAATCCTCAAGAAGGACGTATCGAGAAGTGGATCCTTAGGAAG
GCCTTCGATGATGAGGAGCGACCCTATCTGCCAAAGCATGTTCTGTACAG
ACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGTTGGATTGATGGCC
TCAAAGCACATGCTGAACAACATGTGACTGATAAAATGGTGCAAAATGCT
CAATACATCTTCCCACACAACACACCTTTGACTAAAGAAGCCTACTACTA
CAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCAGCCAGGCTAACTG
TCCCAGGAGGTGCGAGTGTAGCATGCAGCACGGNCTAAGCTGTCGAATGG
GATGC
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