FC924884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924884 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.982e-18 Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 431 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSPLASRDVVEIVDRY-RD*LHTSS 613 YS+FTQQELPACKPILTP+WVILTFLV G+ F+P+G+ AS+ VVEIVDRY D + TSS Sbjct: 30 YSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDTDCIPTSS 91 HSP 2 Score: 23.483 bits (49), Expect = 2.982e-18 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 591 ETDCIPVANRTDKGAFFQ 644 +TDCIP ++R + A+ Q Sbjct: 83 DTDCIPTSSRNNMVAYIQ 100
BLAST of FC924884 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 431 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSPLASRDVVEIVDRY 589 YSKFTQQELPACKPILTP WVI TFL+V + F+P+G+ S AS+DVVEIVDRY Sbjct: 30 YSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRY 82
BLAST of FC924884 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17 Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 431 YSKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSPLASRDVVEIVDRY 589 YSKFTQQELPACKPILTP WVI TFL++ + F+P+G+ S AS+DVVEIVDRY Sbjct: 31 YSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRY 83
BLAST of FC924884 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.746e-14 Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 434 SKFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSPLASRD-----------------VVEIVDRY 589 S+FTQQELPACKPILTPKWVILTFLV G+ F+P+G+ AS+ V+EIVDRY Sbjct: 17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVCFKSFLTFLSYNYIYFVIEIVDRY 85 HSP 2 Score: 23.8682 bits (50), Expect = 3.746e-14 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 591 ETDCIPVANRTDKGAFFQ 644 +TDCIP+++R +K + Q Sbjct: 86 DTDCIPLSSRDNKVRYIQ 103
BLAST of FC924884 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 2 Query: 437 KFTQQELPACKPILTPKWVILTFLVVGIAFVPIGITSPLASRDVVEIVDRY 589 +F QQ+LPACKP+LTP VI F+++G F+PIG+ + ASRD +EI+DRY Sbjct: 28 QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRY 78 The following BLAST results are available for this feature:
BLAST of FC924884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924884 ID=FC924884; Name=FC924884; organism=Citrus clementina; type=EST; length=658bpback to top |