FC924897

Overview
NameFC924897
Unique NameFC924897
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length402
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14405 contig Ccv1_Contig14405:57..458. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_DICDI (Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum GN=nosip PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.933e-15
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 2
Query:   92 RHSKNN--NDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQ 319
            RHSK++  N   F  Y E++ L YGT  ERLGKDSIK FD+C LCL   I P+ C KGH++ KECIL  L+ +KK I+
Sbjct:    3 RHSKHSCSNSGKFSNY-ERQLLKYGTTTERLGKDSIKNFDSCSLCLNDVIMPVICNKGHLYCKECILTSLIDQKKLIK 79          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_XENTR (Nitric oxide synthase-interacting protein OS=Xenopus tropicalis GN=nosip PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.435e-14
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+I+ KE IL+ +L +KK+I R
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTAASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKEAILEYILHQKKEIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_XENLA (Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.874e-14
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL KD++K FD CCL L+P  DP+    G+I+ KE IL+ +L +KK+I R
Sbjct:    3 RHGKNCTAGAVYTYYEKKKDTVASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDGYIYEKESILEYILHQKKEIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_DANRE (Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.197e-14
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EKRK     GYGTQ  RLGKD+IK FD C L L+P  DP+  + G+++ KE ILQ +L +K +I +
Sbjct:    3 RHGKNCTAGAVYTYHEKRKDTAASGYGTQSVRLGKDAIKDFDCCSLSLQPCRDPVLTEDGYLYEKEAILQYILHQKTEIAK 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_MACFA (Nitric oxide synthase-interacting protein OS=Macaca fascicularis GN=NOSIP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E IL+ +L +KK+I R
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_HUMAN (Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E IL+ +L +KK+I R
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_BOVIN (Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E IL+ +L +KK+I R
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_MOUSE (Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.072e-13
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH KN    A +TY EK+K     GYGTQ  RL +D++K FD CCL L+P  DP+    G+++ +E IL+ +L +K++I R
Sbjct:    3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKREIAR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_DROME (Nitric oxide synthase-interacting protein homolog OS=Drosophila melanogaster GN=CG6179 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKKDIQR 322
            RH++N    A +TY+EK++     GYGT  +RLGKDS+K FD C L L+P   P+  + G++F KE ILQ +++KK +  R
Sbjct:    3 RHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITKDGYLFDKEAILQYIVTKKNEYSR 83          
BLAST of FC924897 vs. ExPASy Swiss-Prot
Match: NOSIP_CAEEL (Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis elegans GN=R05G6.4 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.371e-11
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   92 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKGHIFWKECILQCLLSKKK 310
            RH KN+   + +TY E+R+     GYGT   RLG DSIK F  C L L+P  +P+    G+IF +E IL+ +L++KK
Sbjct:    3 RHGKNSTAASVYTYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTGYIFDREAILENILAQKK 79          
The following BLAST results are available for this feature:
BLAST of FC924897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NOSIP_DICDI4.933e-1553.85Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_XENTR1.435e-1449.38Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_XENLA1.874e-1449.38Nitric oxide synthase-interacting protein OS=Xenop... [more]
NOSIP_DANRE3.197e-1449.38Nitric oxide synthase-interacting protein OS=Danio... [more]
NOSIP_MACFA9.303e-1445.68Nitric oxide synthase-interacting protein OS=Macac... [more]
NOSIP_HUMAN9.303e-1445.68Nitric oxide synthase-interacting protein OS=Homo ... [more]
NOSIP_BOVIN9.303e-1445.68Nitric oxide synthase-interacting protein OS=Bos t... [more]
NOSIP_MOUSE2.072e-1344.44Nitric oxide synthase-interacting protein OS=Mus m... [more]
NOSIP_DROME4.617e-1344.44Nitric oxide synthase-interacting protein homolog ... [more]
NOSIP_CAEEL7.371e-1144.16Nitric oxide synthase-interacting protein homolog ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YM21FM1 TF Citrus clementina cDNA clone KN0AAP6YM21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924897 ID=FC924897; Name=FC924897; organism=Citrus clementina; type=EST; length=402bp
GTTTCACGTCTGTGGTCTAGAGCAATCAATTTGGGTTTTTCTGTTTCTTT
TTTTTTTCCCAATCAGACAACAAAATCAAACGATGCCGCAGAGGCACTCA
AAGAACAATAACGATCTCGCCTTTTTCACGTACGATGAGAAGCGTAAGCT
CGGATATGGCACGCAGAAGGAGCGGCTCGGCAAGGACTCAATAAAGCCCT
TTGATGCATGTTGCCTTTGTTTGAAGCCGTTCATCGATCCCTTGTGTTGC
CAGAAAGGTCACATCTTCTGGAAAGAATGCATTCTCCAGTGCCTTCTCTC
CAAGAAAAAAGACATTCAAAGGTTTGCTTGCATTCTGCCGTGACTACATA
CTTCTATTTGTCTTTTTCGTTAAACAATTTTGCAAAATTATTTTTTTTAA
TT
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