FC924901

Overview
NameFC924901
Unique NameFC924901
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig793 contig Ccv1_Contig793:68..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_MOUSE (Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.685e-24
Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 2
Query:   26 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            A + E+L  DLEE++ L   + R R+   + SE   +E   K               E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    2 ASVLEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_RAT (Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23
Identity = 73/218 (33.49%), Postives = 116/218 (53.21%), Query Frame = 2
Query:   26 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKEEGPAPV---PTPAKVSSTPALNY-ITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            A   E+L  DLEE++ L   + R R+   + +E   +E     K+ ++    P      PA V +     Y + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    2 ASALEELQKDLEEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_BOVIN (Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.920e-23
Identity = 73/220 (33.18%), Postives = 115/220 (52.27%), Query Frame = 2
Query:   38 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            E+L  DLEE++ L   A R R+   + +E   +E               +L++ E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    6 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220          
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_PONAB (Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23
Identity = 71/221 (32.13%), Postives = 112/221 (50.68%), Query Frame = 2
Query:   35 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K  +    D      + +++K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_MACFA (Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23
Identity = 73/221 (33.03%), Postives = 114/221 (51.58%), Query Frame = 2
Query:   35 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of FC924901 vs. ExPASy Swiss-Prot
Match: CYBP_HUMAN (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.110e-22
Identity = 73/221 (33.03%), Postives = 114/221 (51.58%), Query Frame = 2
Query:   35 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDQMKRNIAKAWTDAR 628
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD MKR I KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
The following BLAST results are available for this feature:
BLAST of FC924901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CYBP_MOUSE7.685e-2433.63Calcyclin-binding protein OS=Mus musculus GN=Cacyb... [more]
CYBP_RAT2.920e-2333.49Calcyclin-binding protein OS=Rattus norvegicus GN=... [more]
CYBP_BOVIN2.920e-2333.18Calcyclin-binding protein OS=Bos taurus GN=CACYBP ... [more]
CYBP_PONAB8.497e-2332.13Calcyclin-binding protein OS=Pongo abelii GN=CACYB... [more]
CYBP_MACFA8.497e-2333.03Calcyclin-binding protein OS=Macaca fascicularis G... [more]
CYBP_HUMAN1.110e-2233.03Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YM23FM1 TF Citrus clementina cDNA clone KN0AAP6YM23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924901 ID=FC924901; Name=FC924901; organism=Citrus clementina; type=EST; length=660bp
CTACTACGCTCTCTTCACTCAGAAGGCAGAAATGGCGGAGGATTTGGTGC
TGGATTTGGAAGAGCTAAGACAACTACGGAGCATCGCAAAACGACCTCGT
ATCGTCTCTCTTATTAACTCTGAGATTCATACCTTGGAGAAGTTGTCAAA
AGAGGAAGGTCCAGCTCCAGTTCCAACACCAGCTAAGGTCTCTTCTACTC
CAGCACTCAACTATATTACGCTTGGATCATTCAGCTGGGATCAGGATAAT
GAAAAAGTCAAGATATATATTTCTTTAGAGGGAGTAGTCCAGGATAAAAT
GGAAGCAGAGTTCAAGCAGTGGTCCTTTGATGTCAAATTCCATGATGTCC
AAGGGAAGAATTACCGGTTTACTAGCCCAAGGTTGAACCAGGAGATTGTT
CCTGAGAAAAGCAAGGTGCTGGTTAAACCCACAAGGGTTGTCATCATGCT
CTTTAAAGCTTCAAAGGGAAATTGGTTAGACTTACAGTACAAAGAGGATA
AGCTGAAGCCAAATCTGGATAAAGAACGAGATCCTATGGCTGGAATTATG
GATTTGATGAAGAATATGTACGAGGAAGGTGACGACCAAATGAAGCGAAA
CATTGCCAAAGCTTGGACAGATGCTAGATCTGGTAAAACCGCTGATCCTC
TGAAGGGATA
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