FC924946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 3.530e-90 Identity = 143/214 (66.82%), Postives = 179/214 (83.64%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGETAK 643 RNP YTAVRF FT FIA++ G++FWD+G+K KSQDL NAMGSM+ A++FLG+Q SSVQPVV++ERTVFYRE+AAGMYS +P+A Q IEIPYIFVQSV Y +IVYAM+G++W KF WY F M+ TLL FTFYGM+ VA+TPN ++A+IV+ FYG+W LF GF+IPRPR+PVWWRWYYWANPVAWTLYGL+ASQFGD++ ++ + ET + Sbjct: 1177 RNPAYTAVRFIFTTFIALIFGTMFWDLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQTKLSDNETVE 1390
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 6.658e-89 Identity = 144/214 (67.29%), Postives = 174/214 (81.31%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGETAK 643 RNP Y AVRFFFT IA+L G++FWD+G K KSQDLFNAMGSM+ A++F+G+ C+SVQPVV+VERTVFYRE+AAGMYS P+A Q +IEIPY VQ+ VY +IVYAM+G++WTA KF WY FFM TLL FTFYGM+ V +TPN+HIA+IVS+ FY IW LF GFVIPRPR+P+WWRWY WA PVAWTLYGL+ SQFGD+E M++G K Sbjct: 1200 RNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPMEDGTPVK 1413
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 6.658e-89 Identity = 144/214 (67.29%), Postives = 174/214 (81.31%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGETAK 643 RNP Y AVRFFFT IA+L G++FWD+G K KSQDLFNAMGSM+ A++F+G+ C+SVQPVV+VERTVFYRE+AAGMYS P+A Q +IEIPY VQ+ VY +IVYAM+G++WTA KF WY FFM TLL FTFYGM+ V +TPN+HIA+IVS+ FY IW LF GFVIPRPR+P+WWRWY WA PVAWTLYGL+ SQFGD+E M++G K Sbjct: 1200 RNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPMEDGTPVK 1413
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.142e-87 Identity = 143/207 (69.08%), Postives = 174/207 (84.06%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622 RNP YTAVRF FT IA++ G++FWD+G KT+ QDL NAMGSM+TA++FLGLQ +SVQPVV+VERTVFYRE+AAGMYS +P+A AQ IEIPY+ VQ++VY +IVYAM+G++WTA KF WY FFMY + L FTFYGM+ VA+TPNHHIA++VS+ FYGIW LF GF+IPRP +PVWW WYYW PVAWTLYGLIASQFGD+ + M Sbjct: 1165 RNPPYTAVRFLFTIGIALMFGTMFWDLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITEPM 1371
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 1.813e-86 Identity = 137/207 (66.18%), Postives = 175/207 (84.54%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQM 622 RNP YTAVR FT FIA++ G++FWD+G+K ++QDL NAMGSM+ A++FLG+Q SSVQPVVSVERTVFYREKAAGMYS +P+A AQ +IEIPYIFVQ+ VY +IVY+M+G++WT KF W FFFM+ T L FTF+GM+TVA+TPN ++A+IV+ FY +W LF GF++PRPRIP+WWRWYYW P+AWTLYGL+ASQFGD++D + Sbjct: 1178 RNPAYTAVRLIFTTFIALIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQDPL 1384 HSP 2 Score: 69.3218 bits (168), Expect = 1.916e-11 Identity = 39/200 (19.50%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601 RN +FF IA++ ++F+ ++D G++F +I + S + P+ + VFY+++ Y +A+ +++IP F + ++ + Y +MG+D +F F + + + + A+ +A+ + + GF++ R + WW W YW +P+ +++ ++ ++F Sbjct: 531 RNSFVYLFKFFQLLIIALMTMTIFFRTKMPRDSAEDGGIYSGALFFVVIMIMFNGLSEL-PMTLYKLPVFYKQRDFLFYPSWAYAIPSWILKIPVTFAEVGMWVFLTYYVMGFDPNVGRFFKQFLLLLLVNQMASALFRFIAAVGRTMGVASTFGAFALLLQFALGGFILARNDVKDWWIWGYWTSPLMYSVNAILVNEF 729
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 4.466e-85 Identity = 136/214 (63.55%), Postives = 170/214 (79.44%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGETAK 643 RNP Y A+R FFT IA+L G++FWD+G KT KSQDLFNAMGSM++A++F+G+ SVQPVVSVERTVFYRE+AAGMYS P+A Q IE PY VQS++Y +IVY+M+G+ WTA KF WY FFM+ T L FTFYGM+ V +TP++H+A+IVS+ FYGIW LF GF+IPRP++P+WWRWY W PVAWTLYGL+ASQFGD+ M +G K Sbjct: 1207 RNPPYNAIRLFFTTVIALLFGTIFWDLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDIMTPMDDGTPVK 1420
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 4.180e-83 Identity = 135/215 (62.79%), Postives = 170/215 (79.07%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKN-GETAK 643 RNP YTA R FFT IA++ G++FWD+G K S DL NAMGSM+ A++F+G+Q +VQP+V VERTVFYREKAAGMYS LP+A AQ +IE+P+I VQ+++Y ++VY+M+G+DWTA KF WY FFM+ T L FT+YGM+ VA+TPN IAAIV+ FY IW +F GF+IPRPRIP+WWRWYYWA PVAWTLYGL+ SQFG+ D M + ET K Sbjct: 1183 RNPSYTATRLFFTVVIALIFGTIFWDLGKKRSTSLDLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTMSDVDETVK 1397
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.709e-82 Identity = 132/212 (62.26%), Postives = 172/212 (81.13%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNGET 637 RNP YTAVR FT IA++ G++FW++G++T+K QDLFNAMGSM+ A++++G+Q SVQPVV VERTVFYRE+AAGMYS P+A Q IE+PYI VQ+++Y V+VY+M+G++WT KF WY FFMY TLL FTFYGM+ V +TPN IAAI+S+ FY +W LF G++IPRP+IPVWWRWY W PVAWTLYGL+ASQFGD++ ++ G+T Sbjct: 1192 RNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLE-GDT 1402
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 7.883e-82 Identity = 134/215 (62.33%), Postives = 174/215 (80.93%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQ-MKNGETAK 643 RNP YTA R FFT IA++ G++F ++G K K DLFN++GSM+ A++F+G+Q +VQP+V VERTVFYREKAAGMYS LP+A AQ +IEIP+IF+Q+VVY +IVY+++G+DWT EKF WY FFM+ T + FTFYGM+ VA+TPN IAAIVST FY IW +F GF+IPRPRIP+WWRWY WA PVAWTLYGL+ASQ+GD+ + +++GE + Sbjct: 1186 RNPSYTATRIFFTTVIALIFGTIFLNLGKKINKRLDLFNSLGSMYAAVLFIGIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQ 1400 HSP 2 Score: 68.1662 bits (165), Expect = 4.268e-11 Identity = 43/195 (22.05%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 29 FFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQ---YCSSVQPVVSVERT-VFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQF 601 + F ++LGS+ + +T+ + G++F +FLGL + + +S+ + +FY+++ Y +AL +++IP F++ V+ + Y +MG+D E+F ++ + + + + L A+ +A + I + GF+I R I WW W YW++P+ + + ++F Sbjct: 524 YIFKILQLIILGSIGMTVFLRTKMHRRSVED-GAIFLGAMFLGLVTHLFNGFAELAMSIAKLPIFYKQRDLLFYPSWAYALPTWVLKIPISFLECAVWICMTYYVMGFDPNIERFFRHYVLLVLISQMASGLFRLLAALGREMVVADTFGSFAQLILLVLGGFLISRENIKKWWIWGYWSSPLMYAQNAIAVNEF 717
BLAST of FC924946 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 5.110e-81 Identity = 133/210 (63.33%), Postives = 163/210 (77.62%), Query Frame = 2 Query: 2 RNPHYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQMKNG 631 RNP Y A+R FFT IA++ G++FWD+G K +SQDLFNAMGSM+ A++F+G+ SVQPVVSVERTVFYRE+AAGMYS LP+A Q IE PY VQSV+Y +IVY+M+G+ WT KF WY FFM+ TLL FTFYGM+ V +TP++H+A+IVS+ FY IW LF GFVI RP PVWWRWY W PVAWTLYGLI SQ+GD+ M +G Sbjct: 1211 RNPPYNAIRLFFTTVIALIFGTIFWDLGGKMGQSQDLFNAMGSMYAAVLFIGVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDIVTPMDDG 1420 The following BLAST results are available for this feature:
BLAST of FC924946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924946 ID=FC924946; Name=FC924946; organism=Citrus clementina; type=EST; length=648bpback to top |