FC924949

Overview
NameFC924949
Unique NameFC924949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11882 contig Ccv1_Contig11882:418..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.498e-86
Identity = 152/229 (66.38%), Postives = 184/229 (80.35%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            R+R     SRNG+DLIWADYGPHYVKVRKV T          +LRPIREDEVTAMVES+FRDC  PE + + ++LR YL AV+FNNITRL  GKRFM+ EGV++EQG+EFK I+ NG+KLGA +++AE+ PWLRWMFP +E+ + +H  RRD+LT+ IM EHTLARQK  G AK HFVDALL L+++Y+LS+DTIIGLLW+MI AGMDTT IT EWAMAE+IKNPRVQQ
Sbjct:   96 RNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLRWMFPADEKAFAEHGARRDRLTRAIMEEHTLARQKSSG-AKQHFVDALLTLKDQYDLSEDTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQ 323          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 6.598e-85
Identity = 152/229 (66.38%), Postives = 184/229 (80.35%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            RSR A + SR+GKDLIWADYGPHYVKVRKV T          ALRPIREDEVT+MV+S++  CT+ E  G+ + LR +L  V+FNNITRL  GKRF++ EGV++EQG+EFK I+ NG+KLGA + +AE+ PWLRWMFPLEE  + KH  RRD+LT+ IMAEHT AR+K GG AK HFVDALL LQ++Y+LS+DTIIGLLW+MI AGMDTT I+VEWAMAELI+NPRVQQ
Sbjct:   97 RSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIMAEHTEARKKSGG-AKQHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQ 324          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.801e-74
Identity = 135/229 (58.95%), Postives = 175/229 (76.42%), Query Frame = 1
Query:    4 RSRPALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            R+R   R SRNG+DLIWADYGPHY+KVRK+            ALRPIREDEVTAMVES++R  T P  +G+ M +R++LS V+FNNITRL  GKRFM+  G ++EQG EFK I+ NG+K+GA +++AE+  +LRW+ PL EE Y  HNERRD+LT  I+ EH  + ++ G  AK HFVDAL  L+++Y+LS+DT+IGLLW+MI AGMDTT I+VEWAMAEL++NPRVQ+
Sbjct:  100 RNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEFIWYLRWLCPLNEELYKTHNERRDRLTMKIIEEHAKSLKESG--AKQHFVDALFTLKQQYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQK 326          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20
Identity = 69/240 (28.75%), Postives = 120/240 (50.00%), Query Frame = 1
Query:    7 SRP----ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE--EEKYVKHNERRDKLTKTIMAEHTLARQKGG--GAAKPHFVDALLNLQEE----YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            SRP    A R+  +  D+ ++ YG ++ +VRK+            + R IRE+EV  M+E I + C+     G+ + L + L  +S   ITR+  GK++   E    E+  +F D+      L     + +Y P   W+  L   + +  +++   D     ++ +H L+R+  G  G  +   VD LL+LQ++      L+ + +  ++ +M   G DTT +T+EWAMAELIK+P V +
Sbjct:   97 SRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCST----GEAVNLSELLLLLSSGTITRVAFGKKYEGEE----ERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGELDAFVDHVIDDHLLSRKANGSDGVEQKDLVDVLLHLQKDSSLGVHLNRNNLKAVILDMFSGGTDTTAVTLEWAMAELIKHPDVME 328          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.656e-19
Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   37 GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRF-MSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLE-EEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQ 690
            G+ + +A  G ++  +R++++          A    R+ +V AM++ I ++      KG  +++R +L   + NNI   V G+RF MS E   NE+  + ++++  G +L      A++ PWLR + PL    +  +   R       I+ +H    Q+     +  FVD LL+LQ E +L ++ +I +LW MI  G DTT +  EW MAEL+ +P  Q+
Sbjct:  158 GRAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEY---HSKGV-VRVRRHLQGAALNNIMGSVFGRRFDMSHE---NEEVKKLREMVDEGFQLLGAFNWADHLPWLRPLDPLRIHARCARLVPRVTTFVSNIIEQHRREEQRRESGDQCDFVDVLLSLQGEDKLDEEDMIAVLWEMIFRGTDTTALLTEWTMAELVLHPEAQK 370          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19
Identity = 71/238 (29.83%), Postives = 118/238 (49.58%), Query Frame = 1
Query:    7 SRP----ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKR-FMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWM-FPLEEEKYVKHNERRDKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEY------ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            SRP    A  ++ N +DL++A YGP +  +RK+ +            R +R+DEV  +  ++      P K GQ       L+  + N + R++LGKR F    G ++ Q  EFK ++   + +     + ++ P L W+       K  K + R D     I+ EH   + K  G  K   +  L++L+ +       +L+D  I  LL N+ +AG DT++ TVEWA+AELI+NP++
Sbjct:   99 SRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALASAGQKPVKLGQ------LLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQLNWLDIQGVAAKMKKLHARFDAFLTDILEEH---KGKIFGEMKD-LLSTLISLKNDDADNDGGKLTDTEIKALLLNLFVAGTDTSSSTVEWAIAELIRNPKI 326          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 61/232 (26.29%), Postives = 112/232 (48.28%), Query Frame = 1
Query:   25 LSRNGKDLIWA------DYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRF--MSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEE--EKYVKHNERRDKLTKTIMAEHTLARQKGGGAA-KPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            L R+ ++L++A        G ++  +R++++          A  P R+ + TAM+ ++  +    +     + LR +L A + NNI   V G+R+   S  G   ++  + K ++  G +L      +++ PWL  ++       +      R     + ++ +H L R     AA    FVD LL+L+    L++D ++ +LW MI  G DTT +  EW MAE+++NP VQ
Sbjct:  146 LKRSARELLFARAIGFAPSGEYWRLLRRIASTHLFSPRRVAAHEPGRQADATAMLSAMAAE----QSATGAVVLRPHLQAAALNNIMGSVFGRRYDVSSSSGAAADEAEQLKSMVREGFELLGAFNWSDHLPWLAHLYDPNHVARRCAALVPRVQAFVRGVIRDHRLRRDSSSTAADNADFVDVLLSLEAHENLAEDDMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQ 373          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 61/232 (26.29%), Postives = 107/232 (46.12%), Query Frame = 1
Query:   10 RPALRLSRN---GKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEE--EKYVKHNERRDKLTKTIMAEHTLARQKGGGAA-KPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQ 687
            RP  R +R     + + +A  G ++ ++R+V++          +  P R+ +  AM+ SI  +    +     + LR +L A + NNI   V G R+    G    +    K ++  G +L      +++ PWL  ++       +      R     + ++ EH   RQ          FVD LL+L+ + +L DD ++ +LW M+  G DTT +  EW MAEL+++P VQ
Sbjct:  141 RPVKRSARELMFARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAE----QSASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEHLKSMVREGFELLGAFNWSDHLPWLAHLYDPSNVTRRCAALVPRVQTFVRGVIDEHRRRRQNSAALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQ 368          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18
Identity = 64/227 (28.19%), Postives = 115/227 (50.66%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYE---LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            A  L+ N +D+++A YGP +  +RK+S               +R +E+  M++S+    ++  ++GQ + + + L+    N I +++L KR    +GV   +  EFKD++   + +     + ++ P L WM     EK +K   ++ D L   +  EH     +  G  KP F+D ++   +  E   LS   I  LL N+  AG DT++  +EWA+AE++KNP +
Sbjct:  106 ATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSM----SDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGV---EVNEFKDMVVELMTIAGYFNIGDFIPCLAWMDLQGIEKRMKRLHKKFDALLTKMFDEHKATTYERKG--KPDFLDVVMENGDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAI 323          
BLAST of FC924949 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 63/227 (27.75%), Postives = 114/227 (50.22%), Query Frame = 1
Query:   16 ALRLSRNGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVKHNERR-DKLTKTIMAEHTLARQKGGGAAKPHFVDALLNLQEEYE---LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRV 684
            A  L+   +D+++A YGP +  +RK+S               +R +E+  M++S+F    +  ++G+ + + + L+    N I +++L KR    +GV   +  EFKD++   +       + ++ P L WM     EK +K   ++ D L   +  EH     +  G  KP F+D ++  ++  E   LS   I  LL N+  AG DT++  +EWA+AE++KNP +
Sbjct:  106 ATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF----DMSREGERVVVAEMLTFAMANMIGQVILSKRVFVNKGV---EVNEFKDMVVELMTTAGYFNIGDFIPCLAWMDLQGIEKGMKRLHKKFDALLTKMFDEHKATSYERKG--KPDFLDCVMENRDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAI 323          
The following BLAST results are available for this feature:
BLAST of FC924949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
C98A3_ARATH3.498e-8666.38Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN6.598e-8566.38Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A1_SORBI1.801e-7458.95Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71A1_PERAE7.431e-2028.75Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C78A4_PINRA1.656e-1929.55Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
F3PH_PETHY3.688e-1929.83Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C78AB_ORYSJ4.817e-1926.29Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A1_MAIZE2.391e-1826.29Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C75A1_PETHY3.122e-1828.19Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A3_PETHY9.084e-1827.75Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YO07FM1 TF Citrus clementina cDNA clone KN0AAP6YO07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924949 ID=FC924949; Name=FC924949; organism=Citrus clementina; type=EST; length=691bp
CGCAGAAGTAGACCTGCTCTTAGGCTTTCTAGAAATGGAAAAGACCTTAT
TTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGTTTCTACTC
TTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAATTAGGGAA
GATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGCACTAACCC
AGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTCAGCAGTAT
CATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTATGAGCCCA
GAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATTCTTGGAAA
TGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACACTCCATGGC
TAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGAAGCACAATGAA
CGCAGAGATAAGCTTACGAAAACCATAATGGCAGAACATACCCTTGCTCG
TCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCTCA
ATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTACTT
TGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAATG
GGCCATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAA
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