FC924955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: TAS_SHIFL (Protein tas OS=Shigella flexneri GN=tas PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.947e-37 Identity = 82/179 (45.81%), Postives = 115/179 (64.25%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWL-KSQPRDKVIIATKVSGYSERSSFLRDNAKVLRVDAA----NIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEGKV 680 MQY ++ S L +S + LGTMTFGEQN+E ++H L YA GIN++D +E YP+P + ETQG T+ Y+ +WL K R+K+IIA+KVSG S R+N K +R D A NI+E++ SLKRL TDY+DL Q+HWP R FG+ Y ++ P+V +++ L A E GK+ Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPS------RNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKI 173
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.947e-37 Identity = 82/179 (45.81%), Postives = 115/179 (64.25%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWL-KSQPRDKVIIATKVSGYSERSSFLRDNAKVLRVDAA----NIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEGKV 680 MQY ++ S L +S + LGTMTFGEQN+E ++H L YA GIN++D +E YP+P + ETQG T+ Y+ +WL K R+K+IIA+KVSG S R+N K +R D A NI+E++ SLKRL TDY+DL Q+HWP R FG+ Y ++ P+V +++ L A E GK+ Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPS------RNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKI 173
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17 Identity = 64/178 (35.96%), Postives = 84/178 (47.19%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQ----NTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQPRDKVIIATKVSGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEGKV 680 M+Y + D+ + S I LGT G EK S E + A + GI ++D++ AY +E GK I + K RD+VI+ATK + + + R + A I E VE SLKRL TDYIDL Q+HWPD P VPI E KEL D GK+ Sbjct: 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKA---IKEYGK---RDQVILATKTALDWKNNQLFR------HANRARIVEEVENSLKRLQTDYIDLYQVHWPD-----------------PLVPIEETAEVMKELYDAGKI 149
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQN-----TEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQPRDKVIIATKVSGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRY 572 M+ KLG SDL + I LGT G N E+ E++ A NG+ +LD++ Y I G+++ I L+ R+ V+IATK + + + F+ DN+ +K+SV++SLKRLNTDYIDL IH+PD + Sbjct: 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGI-------GRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDF------LKKSVDESLKRLNTDYIDLFYIHFPDEH 130
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 58/181 (32.04%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQN--------TEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQPRDKVIIATKVSGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEGK 677 MQY LG +DL +S + LG MTFGE + E+ S I+ A E GIN D++ +Y +E G+ A R+ V++ATKV F R + A I S++ SL+RL DY+D+LQIH +W + PI E L A +++ GK Sbjct: 1 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFAR------REDVVVATKV--------FHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIH-----------------RWDYNTPIEETLEALNDVVKAGK 150
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: ALKE_BABBO (Aldo-keto reductase (Fragment) OS=Babesia bovis PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 396 KVIIATKVSGYSERSSFLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVAL-----FGEYTYDYSKW--RPSVPIVEQLRAFKELIDEGKV 680 KV+IATKV+ S S+LR L D NI ++V+ SL RLNTDYIDLLQ+HWPDRYV + F E +D SVP+ +QL A + L+ +GK+ Sbjct: 2 KVVIATKVASRSSHLSWLRSGDCKLSKD--NILKAVDGSLSRLNTDYIDLLQLHWPDRYVPMNANGDFHEVFHDTENMIDENSVPLEDQLDALQTLLTQGKI 101
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLK--SQPRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDR 569 M+Y LG + L +S + LGTM FG EK + I+ A +NGI D++ Y + G T+ I W Q R+KV++ATKV E S D +R + I+ +E SLKRL TD+I+L Q+H DR Sbjct: 1 MEYTYLGRTGLRVSRLCLGTMNFGVDTDEKTAFRIMDEALDNGIQFFDTANIYG---WGKNAGLTESIIGKWFAQGGQRREKVVLATKV---YEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDR 134
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 159 MQYRKLGDSDLVISEITLGTMTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQPRDKVIIATKVSGYSERSS--FLRDNAKVLRVDAANIKESVEKSLKRLNTDYIDLLQIH 557 M+ RKLG SDL ISE+ LG M+ G + + S IL A E GIN LD+++ Y +G+ + + ++++ D +I+ATK + S + D +K A IKE+V+KSL RL TDYIDL Q+H Sbjct: 1 MRKRKLGTSDLDISEVGLGCMSLGTEKNKALS--ILDEAIELGINYLDTADLYD-------RGRNEEIVGDAIQNRRHD-IILATKAGNRWDDGSEGWYWDPSK------AYIKEAVKKSLTRLKTDYIDLYQLH 119
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 51/174 (29.31%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 165 YRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 YR LG S L +S + LGT +TFG Q T++ + ++++ A++NGIN+ D++E Y GK ++ + + +K + R ++I TK+ F A+ R + +I E ++ SL+RL DY+D++ + PD P+ P+ E +RA +I++G Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY-------AAGKAEVVLGNIIKKKGWRRSSLVITTKI--------FWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPD-----------------PNTPMEETVRAMTHVINQG 180
BLAST of FC924955 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 58/208 (27.88%), Postives = 105/208 (50.48%), Query Frame = 3 Query: 69 NVTGRRSRKLVVRTSSLKTPISAKQAE-KNAMQ-YRKLGDSDLVISEITLGT-MTFGEQNTEKESHEILSYAFENGINILDSSEAYPIPMKKETQGKTDLYIASWLKSQ--PRDKVIIATKVSGYSERSSFLRDNAKVLR-VDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVALFGEYTYDYSKWRPSVPIVEQLRAFKELIDEG 674 + TG +R + +T S S + K +Q YR LG S L +S + LGT +TFG Q T++ + ++++ A++NGIN+ D++E Y GK ++ + + +K + R ++I TK+ F A+ R + +I E ++ SL+RL +Y+D++ + PD P+ P+ E +RA +I++G Sbjct: 5 STTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY-------AAGKAEVVLGNIIKKKGWRRSSLVITTKI--------FWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPD-----------------PNTPMEETVRAMTHVINQG 180 The following BLAST results are available for this feature:
BLAST of FC924955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924955 ID=FC924955; Name=FC924955; organism=Citrus clementina; type=EST; length=680bpback to top |