FC924976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_CORGL (GTP pyrophosphokinase OS=Corynebacterium glutamicum GN=relA PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.014e-28 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 358 D+I D+ G+R++V+N +CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G PLEVQ RT +MH AEFG AAHWRYKE HS + + W R +L WQ EA Sbjct: 285 DDIFDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKPLEVQARTHDMHYNAEFGIAAHWRYKETKGSHSGEQAEVDQMAWMRQLLDWQKEA 401
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_MYCLE (Probable GTP pyrophosphokinase OS=Mycobacterium leprae GN=relA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 358 D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +L WQ EA Sbjct: 310 DDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 430
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_MYCTU (Probable GTP pyrophosphokinase OS=Mycobacterium tuberculosis GN=relA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 358 D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +L WQ EA Sbjct: 313 DDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 433
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_MYCBO (Probable GTP pyrophosphokinase OS=Mycobacterium bovis GN=relA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 358 D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +L WQ EA Sbjct: 313 DDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREA 433
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_HAEIN (GTP pyrophosphokinase OS=Haemophilus influenzae GN=relA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 5 LTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 349 L ++D+ +R+IV+ +DCY AL +VH + +P + DY+ PK NGYQS+HTVV G+G P+EVQIRT++MH AE G AAHW+YKEG+ S + + W R +L WQ Sbjct: 270 LEFSGLYDVRAVRIIVQKLQDCYTALGIVHTQFKHLPKEFDDYVANPKPNGYQSIHTVVLGKGGKPIEVQIRTQQMHDDAELGMAAHWKYKEGNTGSMSAYEEKIAWLRKLLAWQ 384
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: SPOT_SYNY3 (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) GN=spoT PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 2 Query: 14 DEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 355 +EI+DI LR+IVE++ +CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G PLE+QIRT+EMH AE+G AAHW+YKE ++ + E W R +L WQ + Sbjct: 287 EEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVLGLTSRPLEIQIRTEEMHHVAEYGIAAHWKYKESGGSENATLTSTDEKFTWLRQLLDWQSD 403
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STRCO (GTP pyrophosphokinase OS=Streptomyces coelicolor GN=relA PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 60/128 (46.88%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 17 EIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWARWVLTWQCE 355 EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R +L WQ E Sbjct: 358 EIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWLRQLLDWQKE 485
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_STRAT (GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 17 EIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWARWVLTWQCE 355 EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R +L WQ E Sbjct: 355 EIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVARASKVRTDVPKPAKGKDDHLNDMAWLRQLLDWQKE 481
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_PHOAS (GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG 15956) GN=relA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.206e-25 Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 2 Query: 5 LTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCE 355 L DE+ D+ +R++ E +DCY AL VVH + +P + DY+ PK NGYQS+HTVV G +E+QIRTK+MH ++E G AAHW+YKEG S + + W R +L WQ E Sbjct: 267 LEFDELFDVRAVRIVAEELQDCYAALGVVHTKYRHLPKEFDDYVANPKPNGYQSIHTVVLGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGTASGGAQSAYDEKINWLRKLLAWQEE 385
BLAST of FC924976 vs. ExPASy Swiss-Prot
Match: RELA_SHIFL (GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 2 Query: 5 LTMDEIHDIHGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 355 L DE+ D+ +R++ E +DCY AL +VH + +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAHW+YKEG S + W R ++ WQ E Sbjct: 268 LAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386 The following BLAST results are available for this feature:
BLAST of FC924976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924976 ID=FC924976; Name=FC924976; organism=Citrus clementina; type=EST; length=751bpback to top |