FC924986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRASB (50S ribosomal protein L7/L12 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplL PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15 Identity = 49/133 (36.84%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V PG G + F + L G + K++VIKEVR TGLGLKE+K+LVE P +K GV KDEA+KI +L++ GA+V ++ Sbjct: 7 IVDDLSALTVLEAAELAKLLEEKWGVSAAAAVAVAAPGAGGAAAAPAEEKTE-------------FTVVLASAG-DKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEAEKIKGQLEKAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_RHOPB (50S ribosomal protein L7/L12 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplL PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 IVD++S L+++E +LA ++ K G+ + V P + F + L G E K++VIKEVR TGLGLKE+K+LVE P +K GV KDEADKI A+L++ GA+V ++ Sbjct: 7 IVDDLSSLTVLEAAELAKLLEEKWGVSAAAAVAVAGPAAAAAAPAEEKTE---------------FTVVLAAAG-EKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVNKDEADKIKAQLEKAGAKVELK 123
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_OCHA4 (50S ribosomal protein L7/L12 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplL PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IVD++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K G +KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVDDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGASKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_CHLPD (50S ribosomal protein L7/L12 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rplL PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + ++V+EI L+L E +L + K G+ P MM G+ FD+ L G E+K+ VIK VR TGLGLKE+K+LV+ P +K G++KDEA+K+ +LK+VGA V ++ Sbjct: 3 IETLVEEIGKLTLTEASELVKALEEKFGVSAAP---AMMAGV---------MAAAPAGDAPAQEEKTEFDVVLTAAG-ESKINVIKVVRALTGLGLKEAKDLVDGAPKTVKEGISKDEAEKVAKELKDVGASVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_BRUO2 (50S ribosomal protein L7/L12 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplL PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G FD+ L GA K+ VIKEVR TGLGLKE+K+LVE P +K GV+KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAAG--------------GAAPAAAAEEKTEFDVVLADGGAN-KINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGVSKDEAEKIKAQLEAAGAKVELK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_THEM4 (50S ribosomal protein L7/L12 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplL PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 139 EKVASIVDEISCLSLVEVMDLADVVRNKLGIK-EMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPT---LLKRGVTKDEADKIVAKLKEVGAQVSME 552 EK+ IV+EI L++ E+ +L ++ +K G+ P M + + G FD+ L+ +GA+ K+ VIK VR TGLGLKE+K+LVEK T ++K+GV KDEA++I KL+E GA+V ++ Sbjct: 2 EKLEQIVNEIEQLTVAELAELVKMLEDKFGVSASAPVMAMPVAGAAAGGGAAAEEKTE-------------FDVVLKSFGAK-KINVIKVVREITGLGLKEAKDLVEKAGTPDAVIKQGVNKDEAEEIKKKLEEAGAEVELK 129
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_PROA2 (50S ribosomal protein L7/L12 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rplL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 + ++V+EI LSL E +L + K G+ P V+ GM + FD++L+ GA K+ VIK VR TGLGLKE+KE+V+ P ++K V+K+EA+KI +LK+ GA+V ++ Sbjct: 4 IETLVEEIGKLSLTEASELVKALEEKFGVSAAP--AVIAGGMAAAPAGDAAAQEEKTE----------FDVELKAAGAN-KINVIKVVRSITGLGLKEAKEVVDGAPKVVKEAVSKEEAEKIAKELKDAGAEVELK 126
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_MESSB (50S ribosomal protein L7/L12 OS=Mesorhizobium sp. (strain BNC1) GN=rplL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A IV+++S L+++E +L+ ++ K G+ + V G + FD+ L GA+ K+ VIKEVR TGLGLKE+K+LVE P +K GV KDEA+KI A+L+ GA+V ++ Sbjct: 4 LAKIVEDLSSLTVLEAAELSKMLEEKWGVSAAAPVAVAAAGGAAAPAAAAEEKTE-------------FDVVLADAGAQ-KINVIKEVRAITGLGLKEAKDLVEGAPKPVKEGVAKDEAEKIKAQLEGAGAKVELK 125
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_MAGSA (50S ribosomal protein L7/L12 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 145 VASIVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 +A +VD++S L+++E +L+ ++ K G+ + V G + FD+ L G E K+ VIKEVR TGLGLKE+K+LVE P +K GV+KDEA+KI L+E GA+V ++ Sbjct: 4 LAKLVDDLSALTVLEAAELSKLLEEKWGVSAAAPVAVAAVAAGAAAPAAEEQTE--------------FDVILTDAG-EKKINVIKEVRAITGLGLKEAKDLVEAAPKSVKDGVSKDEAEKIKKVLEEAGAKVQVK 124
BLAST of FC924986 vs. ExPASy Swiss-Prot
Match: RL7_LYSSC (50S ribosomal protein L7/L12 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 154 IVDEISCLSLVEVMDLADVVRNKLGIKEMPNMCVMMPGMGFSXXXXXXXXXXXXXXXXXXXXXXXFDLKLEGYGAEAKLKVIKEVRGFTGLGLKESKELVEKVPTLLKRGVTKDEADKIVAKLKEVGAQVSME 552 I++ I ++++E+ DL + + G+ + V+ G + FD+ L GAE K+KVIK VR TGLGLKE+KE+V+ P LK GV+KDEA++I KL+EVGA V ++ Sbjct: 6 ILEAIKAMTVLELNDLVKAIEEEFGVTAAAPVAVVAGGAAAAEEKTE------------------FDVVLASAGAE-KIKVIKVVREITGLGLKEAKEVVDNAPKALKEGVSKDEAEEIKTKLEEVGASVEVK 119 The following BLAST results are available for this feature:
BLAST of FC924986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 282
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924986 ID=FC924986; Name=FC924986; organism=Citrus clementina; type=EST; length=757bpback to top |