FC924991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.610e-47 Identity = 101/199 (50.75%), Postives = 130/199 (65.33%), Query Frame = 3 Query: 234 IGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL--DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +G+S SV K +++ V A VT + V+ +DD++D+FGK+LLLELVS+ELDPKTG E+ +KGFAH K+G YE+K VP SFG VGA+LVENEHH+EM++ DI L G + + SWV SK + + R FFT KSYLPSQTP G+ LR +EL LRGDG ERK +R+YDYD YND Sbjct: 57 VGVSTSVTTK------ERALTVTAIVTAQVPTSVYVARGLDDIQDLFGKTLLLELVSSELDPKTGRERERVKGFAHMTL--KEG--TYEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYDTYND 245
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 8.995e-45 Identity = 96/187 (51.34%), Postives = 123/187 (65.78%), Query Frame = 3 Query: 288 STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL---DGPRNGPV-NITCGSWVQSKHVNKQ----KRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 + +VKA TIK +VG L++ +D ++D+ G+SL LELVS+ELD KTG EK T++ +AH +D + YE+ F+VP FG +GAI+V NE +EM+L DI L DG N V I C SWVQ K V + KRIFF NK+YLP QTP GL R +L RGDG GER+ DR+YDYDVYND Sbjct: 83 AVRVKAVATIKVTVGELINRSID-IRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYND 268
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40 Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 294 QVKAFVTIKPSVGGLVSGF-----VDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL---DGPRNGPV-NITCGSWVQSKHVNKQ----KRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +VKA TIK +V GL++ +D+++D+ G+SL LELVS+EL+ KTG +K T+ +AH+ +D G + YE+ F+VP FG +GA++V NE +EM+L D+ L DG N V I C SWVQ K + KRIFF K+YLP QTP GL R E+L RG+G G+R+ DR+YDYDVYND Sbjct: 97 KVKAVATIKVTVEGLLNSLRPSKAIDNIRDLIGRSLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDVYND 285
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.660e-38 Identity = 95/239 (39.75%), Postives = 138/239 (57.74%), Query Frame = 3 Query: 156 PFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQK----STQVKAFVTI----KPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKP------TIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN--GPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 P L G H R + ++ + +P R+ SPS IK ++ ++A +T+ K + V+G +D + DM G++++LEL+S ++ P+T +KP +IK + + G D H++Y ++F V FGE GAI V N H++E +L IV++G GPV+ C SWVQS KR+FF+NK YLPS+TP GL LR +EL +LRGDG G RK DRIYDY YND Sbjct: 31 PLLPGERHGRRKVVVAAISEEVP--RLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHPRT--KKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYND 264
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.391e-37 Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKD---GHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +D + D G+S+LLELVS E DP+ G K + + KD ++Y ++F V FGE GA+ V N H +E Y+ IV++G GP + TC SWVQ V++ +R+FF+N+ YLPS+TP GL LR EL +LRGDG GER+ DR+YDYDVYND Sbjct: 90 LDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYND 250
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.016e-37 Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 288 STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL--DGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +T++KA VT+ S V F+ D+ + L ++LVS+ELDP+TG E+ I G +G D +YE+ F+VP SFG +GA+ V N HH EM L DI + G V C SW+ H KR+FF SYLPSQTP G+ LR EL LRG G GERK DRIYDYDVYND Sbjct: 85 ATEMKATVTVHMSKAAGVRDFLYDL--ILKTWLHVDLVSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERKEHDRIYDYDVYND 263
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.538e-36 Identity = 82/185 (44.32%), Postives = 118/185 (63.78%), Query Frame = 3 Query: 294 QVKAFVTI----KPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPT----IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +V+A VT+ K + + +D D G++++LEL+S +LDPKT K + +K ++ ++ + K + Y ++F V +FG GAI V N+H KE +L I ++G GPV+ C SWVQS+ + KRIFFTN+ YLP++TP+GL LR +EL NLRGDG G RK DRIYD+DVYND Sbjct: 85 KVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKS-KTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYND 268
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.008e-36 Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEKPT----IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 +D D G++++LEL+S ++DPKT K + +K ++ ++ K + Y ++F V +FG GAI V N+H KE +L I ++G GPV+ C SWVQS+ + KRI FTN+ YLPS+TP+GL LR +EL NLRG+G+GERK DRIYDYDVYND Sbjct: 114 LDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNS-KAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYND 274
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.318e-31 Identity = 77/185 (41.62%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 285 KSTQVKAFVTIKPSV--GGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQ---GERKTQDRIYDYDVYND 824 ++ +VK ++T + G S +DD+ D+ G+SLL+EL+SA+ D ++ T++ +A R + YE +FE+P FG VGAI ++N++H++++L + L P G + TC SWV K V+ KRIFF++KSYLPSQTP L + R EEL L+G + GE +RIYDYDVYND Sbjct: 71 QNIKVKGYITAQEEFLEGITWSRGLDDIADIRGRSLLVELISAKTD-----QRITVEDYAQRVWAEAPDEK-YECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELKLP-GGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYND 248
BLAST of FC924991 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.669e-30 Identity = 96/258 (37.21%), Postives = 131/258 (50.78%), Query Frame = 3 Query: 141 VPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIG----------ISPSVNIKAITTFTQKSTQ--VKAFVTIKPSVGGLVSGF--VDDVKD---------MFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-----DGPRNGPVNIT-CGSWVQSKHVNKQKRIFF-TNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTQDRIYDYDVYND 824 VPLS+ R +F A + S+ N + R+G I VN A+TT + Q +K V +K +V + F D+ K+ + G L LELVS+ELDPKTG E I G + E + + +YE+ F GA+ + N HH EM L ++ + D ++ V + C SW+ H + KR FF KSY+PSQTP G+ +LR EL LRG+G GERK DRIYDYDVYND Sbjct: 14 VPLSR---RASFLVAEARRKPST--NARRTRVGSTSTTTTTTTILTDVNGPALTTVAKPGHQYDLKQTVEMKATVSVHMKSFWWSDEKKERARDWAYDLILGSWLTLELVSSELDPKTGQEHDVISGKLKHSRETEKDYDLYEAIFTCRHRLAPSGAVRLVNYHHTEMLLGEVKIFPAGEDPTKSSAVTLFHCQSWIDPSHCSPDKRTFFPVEKSYIPSQTPKGVEKLRKSELEALRGNGCGERKKHDRIYDYDVYND 266 The following BLAST results are available for this feature:
BLAST of FC924991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924991 ID=FC924991; Name=FC924991; organism=Citrus clementina; type=EST; length=825bpback to top |