FC925021

Overview
NameFC925021
Unique NameFC925021
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14677 contig Ccv1_Contig14677:26..653. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 329.717 bits (844), Expect = 7.406e-90
Identity = 163/191 (85.34%), Postives = 172/191 (90.05%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVRLGANKF+ERQPIGTAAQ  D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI+VLTVMGV  S +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GY KGDGLGA+I+GTF+L
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFIL 190          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.112e-88
Identity = 160/192 (83.33%), Postives = 173/192 (90.10%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVRLGANKF+ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI++LTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GY KGDGLGA+I+GTF+L
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFIL 191          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 9.054e-88
Identity = 161/195 (82.56%), Postives = 173/195 (88.72%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQT----QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVRLGANKF+ERQPIGTAAQ      D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI+VLTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF   G Y    GGANVVA GY KGDGLGA+I+GTF+L
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFIL 194          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.182e-87
Identity = 159/192 (82.81%), Postives = 174/192 (90.62%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQ-TQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVRLGAN+++ERQPIGTAAQ   D KDY EPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYI++LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GY KGDGLGA+I+GTF+L
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTFIL 191          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 2.913e-86
Identity = 157/192 (81.77%), Postives = 170/192 (88.54%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDG-KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            ME KE+DV LGANKF ERQP+G AAQ+QD  KDY EPPPAPLFEP EL SWSFYRAGIAEFIATFLFLYI+VLTVMGVV+ ++KC TVGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GY KGDGLGA+I+GTF+L
Sbjct:    1 MEAKEQDVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFIL 192          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 2.913e-86
Identity = 158/191 (82.72%), Postives = 169/191 (88.48%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDV +GANKF ERQPIGTAAQT+  KDY EPPPAP FEPGELKSWSFYRAGIAEFIATFLFLY++VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGY KG GLGA+I+GTFVL
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVL 189          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 3.804e-86
Identity = 158/191 (82.72%), Postives = 169/191 (88.48%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVR+GANKF ERQPIGT+AQ+ D KDY EPPPAPLFEPGEL SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGY KG GLGA+IIGTFVL
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTFVL 189          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 6.488e-86
Identity = 157/191 (82.20%), Postives = 169/191 (88.48%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVRLGAN+++ERQPIGTAAQ  + KDY EPPPAPLFE  EL SWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS++KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGAN V  GY KGDGLGA+I+GTFVL
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVL 190          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 8.474e-86
Identity = 157/190 (82.63%), Postives = 170/190 (89.47%), Query Frame = 2
Query:   59 EGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            E KEEDV+LGANKF E QP+GTAAQT   KDY EPPPAPLFEPGEL SWSFYRAGIAEF+ATFLFLYI++LTVMG+ +S++ CS+VGIQG+AWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYMVMQCLGAICGAGVVKGFM  G Y RL GGANVV  GY KGDGLGA+IIGTFVL
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTD--KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFM-VGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVL 189          
BLAST of FC925021 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.220e-85
Identity = 157/191 (82.20%), Postives = 167/191 (87.43%), Query Frame = 2
Query:   56 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYPKGDGLGAQIIGTFVL 628
            MEGKEEDVR+GANKF ERQPIGT+AQT   KDY EPPPAP FEPGEL SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGY KG GLGA+IIGTFVL
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVL 188          
The following BLAST results are available for this feature:
BLAST of FC925021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PIP12_ORYSJ7.406e-9085.34Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE3.112e-8883.33Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE9.054e-8882.56Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_ORYSJ1.182e-8782.81Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP2_PEA2.913e-8681.77Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_ARATH2.913e-8682.72Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH3.804e-8682.72Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_MAIZE6.488e-8682.20Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP1_SOLLC8.474e-8682.63Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ARATH3.220e-8582.20Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YP18FM1 TF Citrus clementina cDNA clone KN0AAP6YP18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925021 ID=FC925021; Name=FC925021; organism=Citrus clementina; type=EST; length=628bp
CAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAG
CAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTC
GCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGA
CTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGT
CTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTT
TTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATAC
CAAGTGCTCAACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCA
TGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATC
AACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGAC
ACGTGCACTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTG
CTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCC
GGCGGTGCCAACGTCGTAGCTCATGGCTACCCCAAGGGTGATGGTCTTGG
TGCCCAGATTATTGGTACTTTTGTTCTT
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