FC925029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925029 vs. ExPASy Swiss-Prot
Match: CI023_HUMAN (Alba-like protein C9orf23 OS=Homo sapiens GN=C9orf23 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 349 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 672 E+R+ ++RN + A+ LE A VV +GRA K V AE++KRRV GLHQ T + D W T RHV A+ + LSR LD + GYQPP Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
BLAST of FC925029 vs. ExPASy Swiss-Prot
Match: CI023_MOUSE (Alba-like protein C9orf23 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.128e-13 Identity = 43/110 (39.09%), Postives = 55/110 (50.00%), Query Frame = 1 Query: 349 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 672 E+R+ ++RN + A+ LE VV +GRA K V AE++KRRV GLHQ T + D W T RHV A+ + LSR LD S GYQPP Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPP 136
BLAST of FC925029 vs. ExPASy Swiss-Prot
Match: CI023_BOVIN (Alba-like protein C9orf23 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13 Identity = 42/110 (38.18%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 349 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 672 E+R+ A ++RN + A+ LE A VV +GRA K V AE++KRRV GL+Q T + D W T HV A+ + LSR LD + GYQPP Sbjct: 27 EMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPP 136
BLAST of FC925029 vs. ExPASy Swiss-Prot
Match: RPP25_RAT (Ribonuclease P protein subunit p25 OS=Rattus norvegicus GN=Rpp25 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 39/128 (30.47%), Postives = 60/128 (46.88%), Query Frame = 1 Query: 319 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXT----------TRHVSAITITLSRKELDSSSLGYQPP 672 P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKRR+ GLHQ T + +VW T ++V ++ I LS+ LD LGYQPP Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154
BLAST of FC925029 vs. ExPASy Swiss-Prot
Match: RPP25_MOUSE (Ribonuclease P protein subunit p25 OS=Mus musculus GN=Rpp25 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 39/128 (30.47%), Postives = 60/128 (46.88%), Query Frame = 1 Query: 319 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXT----------TRHVSAITITLSRKELDSSSLGYQPP 672 P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKRR+ GLHQ T + +VW T ++V ++ I LS+ LD LGYQPP Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154 The following BLAST results are available for this feature:
BLAST of FC925029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925029 ID=FC925029; Name=FC925029; organism=Citrus clementina; type=EST; length=765bpback to top |