FC925033

Overview
NameFC925033
Unique NameFC925033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC925033_ssr1 microsatellite FC925033_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12399 contig Ccv1_Contig12399:138..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.175e-94
Identity = 171/199 (85.93%), Postives = 187/199 (93.97%), Query Frame = 2
Query:   59 DNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            + L REQYVYLA ++EQAERYEEMVEFMQK+VVGSTPA+ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN++HVSLVK YRSKVE EL+ VCA+IL LL++NL+PSA+ASESKVFYLKMKGDYHRY+AEFK+GDERK A EDTM SYKAAQDIA ADL PTHPIRLGLALNFSVFYYEILNQSDKAC+MA
Sbjct:    2 EGLNREQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMA 200          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 1.207e-93
Identity = 173/205 (84.39%), Postives = 186/205 (90.73%), Query Frame = 2
Query:   41 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            MA  +P+NL+REQ +YLAKLAEQAERYEEMV+FM KLV+ STPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHV LVKEYR KVE ELS VCA IL+LLE+NL+PSAT SESKVFYLKMKGDY+RY+AEFKIGDERK AAEDTM SYKAAQ+IA  DL PTHPIRLGLALNFSVFY+EILN SDKACSMA
Sbjct:    1 MAALIPENLSREQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMA 205          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.021e-92
Identity = 173/205 (84.39%), Postives = 190/205 (92.68%), Query Frame = 2
Query:   41 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            MATT    L+R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHVSLVK+YRSKVE ELS +C+ ILRLL+++LIPSATASESKVFYLKMKGDYHRY+AEFK GDERK AAEDTM +YKAAQD+A ADLAPTHPIRLGLALNFSVFYYEILN S+KACSMA
Sbjct:    1 MATT----LSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMA 201          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.475e-91
Identity = 168/197 (85.28%), Postives = 184/197 (93.40%), Query Frame = 2
Query:   65 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            L R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKN+EHVSLVK+YRSKVE ELS VC+ IL+LL+++LIPSA ASESKVFYLKMKGDYHRYMAEFK GDERK AAEDTM +YKAAQDIA AD+APTHPIRLGLALNFSVFYYEILN SDKAC+MA
Sbjct:    5 LGRDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMA 201          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 3.076e-89
Identity = 167/201 (83.08%), Postives = 187/201 (93.03%), Query Frame = 2
Query:   53 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            +P+NLTREQ +YLAKLAEQAERYEEMV+FM KLV+GS  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN+EHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA+A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILN S+KACSMA
Sbjct:    3 LPENLTREQCLYLAKLAEQAERYEEMVKFMDKLVIGSG-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMA 202          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.575e-88
Identity = 166/201 (82.59%), Postives = 184/201 (91.54%), Query Frame = 2
Query:   53 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            VP+NLTREQ +YLAKLAEQAERYEEMV+FM +LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLALN+SVFYYEILN S+KACSMA
Sbjct:    3 VPENLTREQCLYLAKLAEQAERYEEMVKFMDRLVAVSA-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMA 202          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.171e-80
Identity = 150/197 (76.14%), Postives = 174/197 (88.32%), Query Frame = 2
Query:   65 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            ++RE+ VY+AKLAEQAERYEEMVE+M+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR NEEHV+L+KEYR K+E ELS +C  IL+LL+++L+PS+TA+ESKVFYLKMKGDYHRY+AEFK G ERK AAE TM +YKAAQDIA ADLAPTHPIRLGLALNFSVFYYEILN  DKAC++A
Sbjct:    1 MSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLA 196          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 6.428e-79
Identity = 146/197 (74.11%), Postives = 170/197 (86.29%), Query Frame = 2
Query:   65 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            + RE+ VY+AKLAEQAERYEEMV+FM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV  +KEYRSK+E ELSD+C  IL+LL++NLIPSA+  +SKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YKAAQDIA  +LAPTHPIRLGLALNFSVFYYEILN  D+AC++A
Sbjct:    1 MAREENVYMAKLAEQAERYEEMVQFMEK-VSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 196          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.432e-78
Identity = 143/195 (73.33%), Postives = 169/195 (86.67%), Query Frame = 2
Query:   71 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++A
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 199          
BLAST of FC925033 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.432e-78
Identity = 143/195 (73.33%), Postives = 169/195 (86.67%), Query Frame = 2
Query:   71 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMA 655
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++A
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 199          
The following BLAST results are available for this feature:
BLAST of FC925033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SOYBN3.175e-9485.9314-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14310_SOLLC1.207e-9384.3914-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14338_ARATH1.021e-9284.3914-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH1.475e-9185.2814-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_SOLLC3.076e-8983.0814-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC7.575e-8882.5914-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14333_ORYSJ1.171e-8076.1414-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_SOLLC6.428e-7974.1114-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
14336_SOLLC1.432e-7873.3314-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU1.432e-7873.3314-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB01FM1 TF Citrus clementina cDNA clone KN0AAP8YB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925033 ID=FC925033; Name=FC925033; organism=Citrus clementina; type=EST; length=655bp
CTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACAA
CAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCTA
GCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGCT
GGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAACC
TCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTGG
CGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGGA
ACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTTT
CGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCCG
TCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAGA
TTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCCG
CCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGGG
GCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCAATTT
CTCGGTGTTTTACTACGAGATTCTCAATCAATCTGATAAGGCATGCAGCA
TGGCT
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