FC925059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: T112A_ARATH (TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.493e-33 Identity = 73/124 (58.87%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYA-XXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDEV 422 MRL+THNMLS NIKGV +GFPL IE VIEK+VDFNPDF++++F KIEW+ALV+ +RSMGYA FL+K VCPETGRKFPVNKGIPNMLLHEDEV Sbjct: 1 MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSMGYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHEDEV 124
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: T112B_ARATH (TRM112-like protein At1g78190 OS=Arabidopsis thaliana GN=At1g78190 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.495e-30 Identity = 70/124 (56.45%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYA-XXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDEV 422 MRL+ HNMLS NIKGV N FPL IE EKV K+VDFNPDFL+ +F KI+W+ALV +RSM Y FLRKF VCPETGRKF V+KGIPNMLLHEDEV Sbjct: 1 MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSMEYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLHEDEV 124
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: TR112_MOUSE (tRNA methyltransferase 112 homolog OS=Mus musculus GN=Trmt112 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.603e-19 Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKGVAN-GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDE 419 M+LLTHN+LSS+++GV GFPL ++ +V V+FNP+F+ + PK+EW ALVQA+ ++ A FLRK CPE+GR FP+++GIPNMLL+++E Sbjct: 1 MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADTLNLA-EVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLNDEE 122
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: TR112_BOVIN (tRNA methyltransferase 112 homolog OS=Bos taurus GN=TRMT112 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.953e-19 Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKGVA-NGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDE 419 MRLLTHN+LSS+++GV GFPL ++ +V V+FNPDF+ + PK+EW AL++A+ + + FLRK CPE+GR FP+++GIPNMLL ++E Sbjct: 1 MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADHL-HLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSDEE 122
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: TR112_HUMAN (tRNA methyltransferase 112 homolog OS=Homo sapiens GN=TRMT112 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.444e-17 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKGVAN-GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDE 419 M+LLTHN+LSS+++GV + GFPL ++ +V V+FNP+F+ + PK+EW A ++A+ ++ FLR CPE+GR FP+++GIPNMLL E+E Sbjct: 1 MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNLRLIQVPKGPVEGYEENEE-FLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSEEE 122
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: TR112_DROME (TRM112-like protein OS=Drosophila melanogaster GN=CG12975 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15 Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 54 MRLLTHNMLSS-NIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDEV 422 M+L T+N L+S IKGV GFPL + + K + +FNP F++ I PK++W A+ A++ L+K CPETGR FP++ GIPNMLL+EDEV Sbjct: 1 MKLSTYNFLTSVAIKGVKVGFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENELLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIPNMLLNEDEV 124
BLAST of FC925059 vs. ExPASy Swiss-Prot
Match: TR112_DICDI (TRM112-like protein OS=Dictyostelium discoideum GN=DDB_G0285489 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13 Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 3 Query: 54 MRLLTHNMLSSNIKG-VANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXXFLRKFXXXXXXXXXXXXXXVCPETGRKFPVNKGIPNMLLHEDEV 422 M++LTHNM++ K + GFPL +E + I + +FN +F KNI+PK++W + A S+ + FL+ CP R +P++KGIPNMLL EDE+ Sbjct: 1 MKILTHNMMACTKKQCMGKGFPLKVESTEQIVLEQEFNYEFTKNIYPKLDWLGI--AEISIKFNIPIQLDTTKHSLEDEEFLKTLHNLLCNLKVITGSLTCPNCQRVYPIDKGIPNMLLREDEI 122 The following BLAST results are available for this feature:
BLAST of FC925059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925059 ID=FC925059; Name=FC925059; organism=Citrus clementina; type=EST; length=595bpback to top |