FC925062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.002e-15 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 175 WLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEA---DQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 WL + AAEL F W+L ++ RW P+ R F +RL ++ D+LP +D+F+CTADP+ EP + V++TVLS MA DY Sbjct: 68 WLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDY 143
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 109 LVYYRISYFFKVSDATAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEA--DQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 ++YYR + + AA WL + AAEL + W++ + RWRP R F +RL E LPG+D+F+CTADP EP V++T+LS MA +Y Sbjct: 42 VLYYRATRVPAAGEGRAA----WLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAERYEQNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNY 134
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.376e-14 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 109 LVYYRISYFFKVSDATAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEA--DQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 ++YYR + + AA WL + AAEL + W++ + RW P+ R F RL E + LPG+DVF+CTADP EP V++T+LS MA +Y Sbjct: 37 VLYYRATRVPAAGEGRAA----WLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNY 129
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.728e-13 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 91 FTSLSFLVYYRISYFFKVSDA----TAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE--ADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 F S S V + +F+++ + T L W ++F E+ W++ + RW P+ R F +RL LP +DVF+CTADP EP + V+NTVLS ALDY Sbjct: 34 FFSASVFVCICLIWFYRIGEIGDNRTVLDRLIWFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRRYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDY 140
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.653e-13 Identity = 39/103 (37.86%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 88 HFTSLSFLVYYRISYFFKVSDATAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLP-EADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 H + L+Y+ + S TA L L+ ++++L+F W + R++P+ RT +PE+ E + P +DVFICTADP KEP + V+NT LS MA +Y Sbjct: 52 HTCGIIALMYHHVH-----SLLTANTTLITSLLLLSDIVLAFMWATTTSLRYKPVRRTEYPEKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEY 149
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 172 PWL-LVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEA-DQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 PW A E +F WLL + +W P+ FPE L E D+LP +D+F+ TADP EP + +NTVLS +ALDY Sbjct: 48 PWRRAALACEAWFTFMWLLNVNAKWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDY 123
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.354e-12 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 175 WLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 WL+ F E SF WLL +W P +P+RL E LP +D+F+ TADP +EP + V+NTVLS +A++Y Sbjct: 51 WLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNY 124
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.768e-12 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 175 WLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 W++ F E SF WLL + +W P S +PERL E LP +D+F+ TADP +EP + V NT+LS +A++Y Sbjct: 51 WVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNY 124
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.309e-12 Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 127 SYFFKVSDATAAPLL----------------PWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 SYF + D T LL W++ F E +F WLL +W P +PERL E +LP +D+F+ TADP +EP + V+NTVLS +A++Y Sbjct: 19 SYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNY 124
BLAST of FC925062 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.145e-12 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 175 WLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQLPGIDVFICTADPSKEPTVEVMNTVLSTMALDY 393 WL+ F E SF WL+ +W P +P RL E LP +D+F+ TADP +EP + V+NTVLS +A++Y Sbjct: 51 WLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNY 124 The following BLAST results are available for this feature:
BLAST of FC925062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925062 ID=FC925062; Name=FC925062; organism=Citrus clementina; type=EST; length=394bpback to top |