FC925063

Overview
NameFC925063
Unique NameFC925063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length344
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1937 contig Ccv1_Contig1937:1..344. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.603e-48
Identity = 90/103 (87.38%), Postives = 95/103 (92.23%), Query Frame = 1
Query:    4 RGPF*RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFLRTF 312
            RGP  RGVGLSFG DVTKRFLQDN+LDL VRSHEVKDEGYE+EHDGKLITVFSAPNYCDQMGNKGAFIRFEAP +KPN+VTFSAVPHPDV P+AYA NFLR F
Sbjct:  435 RGPSKRGVGLSFGGDVTKRFLQDNNLDLLVRSHEVKDEGYEVEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMF 537          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.573e-48
Identity = 90/103 (87.38%), Postives = 95/103 (92.23%), Query Frame = 1
Query:    4 RGPF*RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFLRTF 312
            RGP  RGVGLSFG DVTKRFLQ+N+LDL VRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAP +KPN+VTFSAVPHPDV P+AYA NFLR F
Sbjct:  453 RGPSKRGVGLSFGGDVTKRFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMF 555          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.874e-29
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFLR 306
            RGV   FG DVTK FL++N+LD  +RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I  +   L+P    F+AVPHP+V P+AYA   L+
Sbjct:  400 RGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQ 495          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.028e-28
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFLR 306
            RGV   FG DVTK FL++N LD  +RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I  +   L+P    F+AVPHP+V P+AYA   L+
Sbjct:  400 RGVSCQFGPDVTKAFLEENQLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQ 495          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.028e-28
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFLR 306
            RGV   FG DVTK FL++N LD  +RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I  +   L+P    F+AVPHP+V P+AYA   L+
Sbjct:  400 RGVSCQFGPDVTKAFLEENQLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYANTLLQ 495          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.144e-26
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:    4 RGPF*RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPDV*PLAYAYNFL 303
            RGP  RGVGL FG DV+KRF + N L   +RSHEV+D+GYE+EHDG  ITVFSAPNYCD  GN GA I+ +   ++ +   F AVPHP++ P+AYA   L
Sbjct:  372 RGPSKRGVGLQFGPDVSKRFCEANGLKAVIRSHEVRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVK-EDMELDFHQFEAVPHPNIRPMAYANGLL 470          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.253e-18
Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    7 GPF*RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRF--------EAPTLKPNVV--TFSAVPHPDV*PLAYA 291
            GP  RG+G +FG D+T RFL++N L    RSHE++  G + E  GKL+TVFSAPNYCD  GN G  I                 N++  TF AV HPD+ P+AY+
Sbjct:  403 GPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQNLIIETFEAVEHPDIKPMAYS 507          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPE1_MOUSE (Serine/threonine-protein phosphatase with EF-hands 1 OS=Mus musculus GN=Ppef1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTL 228
            RG G  FG DVT + L  N L + +RSHE K +GYE+ HDGK+ITVFSA NY ++  N+GA+IR    T+
Sbjct:  377 RGGGCYFGPDVTSKVLSKNQLKMLIRSHECKPDGYEVSHDGKVITVFSASNYYEEGSNRGAYIRLSYGTM 446          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus GN=Ppef1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.471e-15
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPT 225
            RG G  FG DVT + L  N L + +RSHE K +GYEI HDGK+ITVFSA NY ++  N+GA+IR    T
Sbjct:  366 RGGGCYFGPDVTSKVLNKNQLKMVIRSHECKPDGYEICHDGKVITVFSASNYYEEGSNRGAYIRLSYGT 434          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.211e-14
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSA 255
            RG G  FG DVT+R ++   L L +RSHE K EGYE  H+ K++T+FSA NY +   N+GA+++   P L P++V + A
Sbjct:  465 RGGGCYFGPDVTERLMEKYKLQLLIRSHECKPEGYEFCHNRKVLTIFSASNYYEVGSNRGAYVKL-GPALTPHIVQYQA 542          
The following BLAST results are available for this feature:
BLAST of FC925063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PPP5_ARATH2.603e-4887.38Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
PPP5_SOLLC7.573e-4887.38Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
PPP5_HUMAN7.874e-2958.33Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]
PPP5_RAT1.028e-2858.33Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]
PPP5_MOUSE1.028e-2858.33Serine/threonine-protein phosphatase 5 OS=Mus musc... [more]
PPT1_SCHPO2.144e-2657.00Serine/threonine-protein phosphatase T OS=Schizosa... [more]
PPT1_YEAST6.253e-1845.71Serine/threonine-protein phosphatase T OS=Saccharo... [more]
PPE1_MOUSE1.304e-1552.86Serine/threonine-protein phosphatase with EF-hands... [more]
PPE1_RAT6.471e-1555.07Serine/threonine-protein phosphatase with EF-hands... [more]
PPE2_MOUSE3.211e-1445.57Serine/threonine-protein phosphatase with EF-hands... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA20FM1 TF Citrus clementina cDNA clone KN0AAP3YA20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925063 ID=FC925063; Name=FC925063; organism=Citrus clementina; type=EST; length=344bp
CGAAGAGGGCCCTTTTAGAGAGGAGTGGGTCTTTCATTTGGTGCTGACGT
GACAAAAAGATTCCTGCAGGATAACAGTCTAGATTTATTTGTGCGATCAC
ACGAAGTTAAGGATGAAGGCTATGAGATTGAGCATGATGGCAAACTCATT
ACGGTATTTTCTGCACCAAATTACTGTGATCAGATGGGTAATAAGGGTGC
TTTTATTCGTTTTGAAGCTCCTACCTTGAAGCCAAATGTTGTTACGTTTT
CAGCTGTGCCTCACCCTGATGTCTAGCCATTGGCATATGCCTACAATTTC
CTACGAACGTTTCTTTACTATATCTCACATCGATGGAACGGCAA
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