FC925075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 329.331 bits (843), Expect = 1.226e-89 Identity = 150/221 (67.87%), Postives = 188/221 (85.07%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 SSA ACDRC+H +K AYFS ASALSSGAC YGS+A F GH+AA +PS+YKDG+GCGACFQ+RCKNPTLCS KGT VI+TDLN +NQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+ + VRVEESS+ PNYLA+K+LYQGGQTE+VA+ +AQVGSS+W YM+R++GAVW T +VPNGALQFRFVVT+ YDGK +W++ VLPA+W+ Sbjct: 17 SSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWE 237
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 6.086e-89 Identity = 150/222 (67.57%), Postives = 190/222 (85.59%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSS-NWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 SS ACDRC+H++K AYFS ASALSSGAC YGS+A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LCS KGT V++TDLN SNQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+N+ VRVEE+S+KPNYL +K+LYQGGQTE+V++D+AQVGSS NWGYM+R++GAVW T +VP GA+QFRFVVT YDGK IW+++VLP++W+ Sbjct: 16 SSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWE 237
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.165e-86 Identity = 147/220 (66.82%), Postives = 180/220 (81.82%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQD--ILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 SS ACDRC+H++K +YFS ASALSSGAC YG +A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LC+ KGT V++TDLN SNQTD V+SSRAF A++ G D +LK G+VDVEY+RVPC Y +NL VRVEE+S+KPNYLA+K+LYQGGQTE+V +D+A VGSS W YMSR++GAVW T +VP GALQF+F VT YDGK +W+K VLPA+W Sbjct: 16 SSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANW 235
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.035e-68 Identity = 120/224 (53.57%), Postives = 157/224 (70.09%), Query Frame = 2 Query: 62 ATACDRCVHQTKVAYFSQASAL---SSGACGYGSLALSF--NGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWA-KNVLPADWKP 715 A+AC+RCV K AY S L G CGYG++A+ NGG LAAG P ++ G GCG CFQMRC+N +CS G RV+LTD + SN TDF++ AF L+ G + KL + VEY+R+PC+YK++NL++ VEE S++PN L +K LYQGGQT+++A+DVAQVGSS+W +M+R YG VW R PNG LQFR VVT YDGKW+WA + VLPA+W+P Sbjct: 26 ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQP 249
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.839e-67 Identity = 120/221 (54.30%), Postives = 159/221 (71.95%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS-NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAK-NVLPADW 709 S + CDRCV ++K + + AL++G+CGYGSLA SFNGGHLAA P+L++ G GCGACFQ+RCK+ LCS G +V++TD S N+TD V+S+ A+ A++ G + VDVEYKRVPCEY +NL++RVEE S+ P L+++ LYQGGQT++VA+DVA VGSSNW +M+R+YG W T++ P G LQFR VVT YDGKW+WA VLP W Sbjct: 26 SMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRW 246
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.548e-67 Identity = 115/219 (52.51%), Postives = 160/219 (73.06%), Query Frame = 2 Query: 62 ATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGG-HLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWA-KNVLPADWK 712 A+ CDRCV +++ AY++ + L++G+CGYG+ A +FNGG LAA P+LY+ G GCGAC+Q+RCK+ LCS G RV++TD +N+T V+SS AF A++ G + +L VDVEYKRVPCEY++++L+VRV+E S+ PN L + LYQGGQT++VA+DVAQVGSS+W +M+R +G W + P G LQ R VVT YDGKW+WA + VLP W+ Sbjct: 33 ASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWR 251
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLA4_ORYSJ (Expansin-like A4 OS=Oryza sativa subsp. japonica GN=EXLA4 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41 Identity = 93/249 (37.35%), Postives = 148/249 (59.44%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYF----SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDL-------NHSNQT-----DFVISSRAFMALSNQG-KGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGS--------SNWGYMSRNYGA--VWDTSRVPNGALQFRFVVTSXYDGKWIWAK-NVLPADWKP 715 ++A +CD C + + A+ L+ GACG+G+ + N +AA L++ G CGAC+Q+RC++ LC G +V++ D+ N+T F I+ AF A++ QG ++ + ++V+++R+PCEY+ ++ LAVRVEE+S+ P +LA++ LYQGGQT++ A+++AQ + S+W YM+R GA VW TSR P G L+ R VVT+ GKW+ + VLPADW+P Sbjct: 30 AAAHSCDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGKWLRSDGEVLPADWRP 275
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40 Identity = 77/192 (40.10%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 G CGYG N G ++ L+ +G GCGAC+Q+RCK P CS +G V+ TD + TDF++S +A+ ++ G + GVV+VEY+R+PC Y NL ++ E S P+YLA+ VLY GG +++A++V Q W M R +GAV D P G L RF+V WI + N +PADW Sbjct: 46 GHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADW 237
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39 Identity = 83/224 (37.05%), Postives = 127/224 (56.70%), Query Frame = 2 Query: 56 SSATACDRCVHQTKVAYF--SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ-GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXY---DGKWIWAKNVLPADW 709 S ATA D ++ AY+ S +GAC YG+ + N G ++A SLY+DG GCGAC+Q+RC NP CS G +++TD S+ TDF++S AF ++ G +L LGVV +EY+RV C Y N+N+ ++ ESS PNYL ++ YQ G +++A+ + + + +SR +GAVW P+G L R + +S W+ N++P +W Sbjct: 20 SKATA-DANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASA-SLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNW 241
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30 Identity = 67/199 (33.67%), Postives = 112/199 (56.28%), Query Frame = 2 Query: 128 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQT--DFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 + GACGY + + G + G ++KDG GCG+CF+++C P CS K + +TD+N F +S AF A++ +GK +++ K G++D++++RV C+Y + E PNY AV V Y GG ++V +++ + GS W ++ ++GA+W DT + G R VT+ D K + A +V+P +WK Sbjct: 60 NGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKCSKPEACSDKPVIIHITDMNTEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLKGPFSLR--VTTESDQKLV-ANDVIPDNWK 255 The following BLAST results are available for this feature:
BLAST of FC925075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925075 ID=FC925075; Name=FC925075; organism=Citrus clementina; type=EST; length=716bpback to top |