FC925089

Overview
NameFC925089
Unique NameFC925089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14597 contig Ccv1_Contig14597:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925089 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.804e-38
Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 3
Query:  255 KFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVCXER 563
            KFNVGG   WVTNP ENY  WSG+NRFLV+DTL+F Y KG+DSVL VNK DYD+CNTK P+ ++D GDSE  LDR GPFYFISGN D+C+KGQKL VVV   R
Sbjct:   30 KFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of FC925089 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 3
Query:  264 VGGKHG-WVTNPGENYN--KWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVCXER 563
            VGGK G W   P  +Y+  +W+ + RF V D + F+Y+ G DSVL V K+ Y+SCNT  PL     G+++ KLDRSGPFYFISG + HC+KGQKL +VV   R
Sbjct:   33 VGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPR 135          
BLAST of FC925089 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  264 VGGK-HGWV--TNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVCXER 563
            VGGK   W   ++P E+ NKW+   RF V DTL +KY +  DSVL V KD Y +CNT  P     +GD++ KL+RSGP++FISG+  +C +G+KL +VV   R
Sbjct:   28 VGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
BLAST of FC925089 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 3
Query:  264 VGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 551
            VG   GW T    +Y KW+  N+F V D+L F Y     +VL V+++ + SCN+  P     SG     L R G FYF+ G   HCQ GQK+ + V
Sbjct:    6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of FC925089 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 3
Query:  255 KFNVGGKH-GW---VTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNT-KKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 551
            K+ VGG    W   ++ P ++ + W+  +RF + DTL FKY+K ++SV   N+ DY+ CNT  K  +  + G+++  L + G  +FISGN  HCQ G KL V+V
Sbjct:   28 KYVVGGSEKSWKFPLSKP-DSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 130          
The following BLAST results are available for this feature:
BLAST of FC925089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ENL2_ARATH3.804e-3869.90Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH7.701e-2351.46Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH1.041e-1947.57Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
MAVI_CUCPE2.246e-1439.58Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO552_SOYBN3.586e-1239.42Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YC13FM1 TF Citrus clementina cDNA clone KN0AAP8YC13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925089 ID=FC925089; Name=FC925089; organism=Citrus clementina; type=EST; length=722bp
CTCTGATTTTCCTTCTCCAATCAAATCTCCAAAATCTTTTACTTCCAAGT
AAAAAAGCAATACCAATAAAAACTTCCAATTGGCAGATTTTCTGTGAAGC
TTCTGGGTCATCGTACATATCTATCACTTTCATCGCTATATAAAAACAGA
AAACACACAATTCTAGAGCACATTTCTGTTCAATGGAGTTTCAGAAATCT
CTTTGCCTTTCCTTGGCTCTCTTTGCATTTTTCATCTCTTCCTCTCACGC
ACTCAAATTCAACGTGGGTGGCAAACACGGCTGGGTTACAAACCCTGGAG
AAAATTACAACAAATGGTCTGGGAGAAACAGGTTCCTCGTCAATGATACC
CTCTTTTTCAAGTACAAGAAAGGATCAGACTCGGTGTTGTTAGTGAACAA
AGATGATTACGACAGCTGCAACACGAAGAAGCCTTTGCTGAAACTGGATT
CGGGTGACTCAGAGTTCAAGCTTGATCGTTCGGGTCCTTTCTATTTCATA
AGTGGAAACCATGATCATTGCCAAAAGGGACAGAAATTAATCGTCGTCGT
TTGCATNGAAAGGCCCCCCCCTCCCTCAACTGGACCCCCCACCACGAAAC
CTCCACCGCATGCCCCGTCTCCTAAGTCTCCTTCTCCGGCCACACAGCCG
CCGGCGACTTCCCCCTCCACCTCACCAACATCTCATGCACCTTCGGCTAA
TCCTCCTAAAGGGTCCTCTCCG
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