FC925093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925093 vs. ExPASy Swiss-Prot
Match: ASD1_ARATH (Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1 SV=1) HSP 1 Score: 429.869 bits (1104), Expect = 6.935e-120 Identity = 188/243 (77.37%), Postives = 218/243 (89.71%), Query Frame = 3 Query: 3 VSNWTRVETLLEAKETNPNARLQLTTSREGIIWFDQVSAMPLDTYKGHGFRNDLFQMLANLKPRFVRFPGGCFVEGEWLRNAFRWKASIGPWENRPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGISHTDEVDTSAVLPFVQEALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISNCDGSSSPLDHKADFYDFHIYTS 731 VS W + E LLEAK T+P+ARLQLTT+++G IW DQVSAMP+DT+KGHGFRNDLFQM+A++KPRF+RFPGGCFVEGEWL NAFRWK ++GPWE RPGHFGDVW YWTDDGLG+FEF Q+AED+GA PIWVFNNGISH DEV+T++++PFVQEALDGIEFARGD NSTWGSVRA MG +PF+L+YVA+GNEDCGK YRGNY+ FYDAIK+ YPDI IISNCDGSS PLDH AD+YD+HIYTS Sbjct: 198 VSKWIKKEVLLEAKATDPSARLQLTTTKKGSIWIDQVSAMPVDTHKGHGFRNDLFQMMADIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDVWKYWTDDGLGHFEFFQMAEDIGAAPIWVFNNGISHNDEVETASIMPFVQEALDGIEFARGDANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVFYDAIKKAYPDIKIISNCDGSSHPLDHPADYYDYHIYTS 440
BLAST of FC925093 vs. ExPASy Swiss-Prot
Match: ASD2_ARATH (Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 1.354e-115 Identity = 183/240 (76.25%), Postives = 211/240 (87.92%), Query Frame = 3 Query: 9 NWTRVETLLEAKETNPNARLQLTTSREGIIWFDQVSAMPLDTYKGHGFRNDLFQMLANLKPRFVRFPGGCFVEGEWLRNAFRWKASIGPWENRPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGISHTDEVDTSAVLPFVQEALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISNCDGSSSPLDHKADFYDFHIYT 728 NWT+ E LLEA T+ ARLQ TT+++G IWFDQVSAMP+DTYKGHGFRNDLFQM+ +LKPRF+RFPGGCFVEG+WL NAFRWK ++ WE RPGH+GDVW YWTDDGLG+FEF QLAEDLGA PIWVFNNGISH D+V+T V+PFVQEA+DGIEFARGD NSTWGSVRAAMGHP+PF+L+YVAVGNEDC K YRGNYL+FY+AIK+ YPDI IISNCD S+ PLDH AD++D+HIYT Sbjct: 199 NWTKKEMLLEANGTDNGARLQFTTTKKGSIWFDQVSAMPMDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCFVEGDWLGNAFRWKETVRAWEERPGHYGDVWKYWTDDGLGHFEFFQLAEDLGASPIWVFNNGISHNDQVETKNVMPFVQEAIDGIEFARGDSNSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRGNYLEFYNAIKKAYPDIKIISNCDASAKPLDHPADYFDYHIYT 438
BLAST of FC925093 vs. ExPASy Swiss-Prot
Match: ABF1_STRCX (Alpha-N-arabinofuranosidase 1 OS=Streptomyces chartreusis PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.875e-35 Identity = 87/235 (37.02%), Postives = 123/235 (52.34%), Query Frame = 3 Query: 12 WTRVETLLEAKETNPNARLQLTTSREGIIWFDQVSAMPLDTYKG--HGFRNDLFQMLANLKPRFVRFPGGCFVE-----------GEWLRNAFRWKASIGPWENRPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFN---NGISHTDEVDTSAVLP-FVQEALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCGKKNYRGNYLKFYDAIKRTYPDIGIISN 665 W + A T+ RL + + + D VS P DTY+ +G R DL + +A L P FVRFPGGC V G + +++WK ++GP E R + + W Y GLGY+E+ + +ED+GA+P+ V G VD A+L +Q+ LD IEFA G S WG VRA MGHP PF L ++ VGNE+ + + +F AI+ YPDI ++SN Sbjct: 179 WAKYRATFTATRTSNRGRLAVAANDAAAL--DMVSLFPRDTYRNQQNGLRKDLAEKIAALHPGFVRFPGGCLVNTGSMEDYSAASGWQRKRSYQWKDTVGPVEERATN-ANFWGYNQSYGLGYYEYFRFSEDIGAMPLPVVPALVTGCGQNKAVDDEALLKRHIQDTLDLIEFANGPATSKWGKVRAEMGHPRPFRLTHLEVGNEENLPDEFFDRFKQFRAAIEAEYPDITVVSN 410
BLAST of FC925093 vs. ExPASy Swiss-Prot
Match: ABFA_ASPNG (Alpha-N-arabinofuranosidase A OS=Aspergillus niger GN=abfA PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28 Identity = 72/210 (34.29%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 129 DTYKG--HGFRNDLFQMLANLKPRFVRFPGGCFVEGEWLRNAFRWKASIGPWENRPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGISHTDEVDT----SAVLPFVQEALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDC---GKKNYRGNYLKFYDAIKRTYPDIGII-----SNCDGSSSPLDHKADFYDF 716 +TYK +G + L +L ++K F+RFPGG +EG N ++W +IG +RPG G W Y+ DGLG E+ EDLG +P+ +G + +T A+ P++ + L+ +E+ GD ++T+G+ RAA G +P++L V +GNED G ++Y + FYDAI YPD+ +I ++C S P D++D+ Sbjct: 215 ETYKSRENGLKPQLANVLDDMKGSFLRFPGGNNLEGNSAENRWKWNETIGDLCDRPGREG-TWTYYNTDGLGLHEYFYWCEDLGLVPVLGVWDGFALESGGNTPLTGDALTPYIDDVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNEDMLGGGCESYAERFTAFYDAIHAAYPDLILIASTSEADCLPESMPEGSWVDYHDY 423
BLAST of FC925093 vs. ExPASy Swiss-Prot
Match: ABF2_BACOV (Alpha-N-arabinofuranosidase 2 OS=Bacteroides ovatus GN=asdII PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 64/230 (27.83%), Postives = 94/230 (40.87%), Query Frame = 3 Query: 90 GIIWFDQVSAMPLDTYKGHGFRNDLFQMLANLKPRFVRFPGGCFVEGEWLRNAFRWKASIGPWENRPGHFGDVWMYWTDD-GLGYFEFLQLAEDLGALPIWVFNNGISHTDEVDTSAVLPFVQEALDGIEFARGDPNSTWGSVRAAMGHPDPFDLRYVAVGNEDCG-----KKNYRGNYLKFYDAIKRTYPDIGIISNCDGSS-----------SPLDHKADFYDFHIYT 728 G +W + S +P G+R D+F L +L +R+PGGCF + + W IGP ENRP + W +D G EFL L E LG P +V N S T V+E +E+ D +S ++R G + L+Y+ VGNE G + Y + + Y R Y + G+S + + H+ D H YT Sbjct: 55 GGLWVGENSDIP----NIKGYRTDVFNALKDLSVPVLRWPGGCFAD------EYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCEMLGCEP-YVSGNVGSGT-----------VEELAKWVEYMTSDGDSPMANLRRKNGRDKAWKLKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNRLFKIASGASDYDYKWTDVLMNRVGHRMDGLSLHYYT 262 The following BLAST results are available for this feature:
BLAST of FC925093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925093 ID=FC925093; Name=FC925093; organism=Citrus clementina; type=EST; length=733bpback to top |