FC925138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77 Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 3 Query: 291 SKHAVDNPDEIA----SMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 ++HAV NPDE+A ++ EMS RN TERRKLGYF+CGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDD+PVNP+PGTLRHAVIQD+PLWIVFKRDMVIQLKQELIVNSF+T+DGRGANVHIANGGCITIQFV Sbjct: 41 NQHAVTNPDEVADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFV 192
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.168e-74 Identity = 142/231 (61.47%), Postives = 175/231 (75.76%), Query Frame = 3 Query: 123 TQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAE---SSMNSTMAAKAEVVAEALS-------------------KHAV-DNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 +Q+ I +C AV+++L ++ A + ++S+SRK+K E SS +STMAA ++ E +HAV D+PD E+A +V+MS +N T RRKLG+FSCGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFY+VTDP D+D VNPKPGTLRHAVIQ++PLWIVFKRDMVI+LKQELI+NSF+T+D RG+NVHIANG CITIQF+ Sbjct: 5 SQKLISVCVAVLVVL--ALTAMIFRNSEISLSRKLKTEVIQSSNSSTMAAIRKLKTEEFQSLNSSTMAATRLDGEPQQQQHAVADDPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFI 233
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.209e-71 Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 3 Query: 282 EALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 E +HAV+NPDE+A+MV+MS RNSTERR+LGYFSC TGNPIDDCWRCD W RKRLADC IGFGRNAIGGRDGRFYVVTDP DDDPVNP PGTLRHAVIQD+PLWI+FKRDMVI LKQELI+NSF+T+DGRG NVHIANG C+TIQ+V Sbjct: 29 ETWHEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYV 179
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.521e-69 Identity = 127/207 (61.35%), Postives = 151/207 (72.95%), Query Frame = 3 Query: 114 MAVTQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 MAVTQ + A++L +F + + S R+ E +HAV+NP+E+A+MV+MS RNST RR+LGYFSC TGNPIDDCWRCD W RK LA+C IGFGRNAIGGRDGR+YVV+DP DD+PVNPKPGTLRHAVIQ++PLWIVFKRDMVI LK+ELI+NSF+T+DGRG NVHIANG CITIQFV Sbjct: 1 MAVTQILVVFASALLLSMFFTGVDSTRSN---------------------------ETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFV 180
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 2.521e-69 Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 3 Query: 114 MAVTQRGICLCFAVVLMLFVSVLASVRNEQDVSVSRKMKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 M + R +++L + + +S ++ + + + SS NS+ A K A ++HAV NP+E+A+MV+M +NSTERR+LG+FSC TGNPIDDCWRCD NWH RKRLA+C IGFGRNAIGGRDGR+YVVTDP D D VNP+PGTLRHAVIQD+PLWIVFKRDMVI L QELI+NSF+T+DGRG NV IA G CITIQ+V Sbjct: 1 MVIFSRSFLALSTTLIILALCINSSTMAQE----TEDLNSHSSSNSSTANKLPNDDGAWNEHAVKNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYV 203
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.407e-66 Identity = 126/204 (61.76%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 144 CFAVVLMLFVSVLASVRN--EQDVSVSRKMKAESSMN---STMAAKAEVVAEALSKHAVDNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQ 728 CF V+L +FV + + N ++S SRK+K E S + S M + + V E L++HAV +PD E+++++ MS +N T RRKLG+FSCG GN IDDCWRCD NW+KNRK LADCG+GFG A GGR+G +YVVTD DDD VNPKPGTLRHAVIQ +PLWI+FKRDMVI+LKQELI+NSF+T+D RGANVHIANG CITIQ Sbjct: 12 CF-VLLFIFVGCVLTATNLRNNEISRSRKLKTEDSKSFNSSPMTTRLDGVVE-LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQ 213
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.407e-66 Identity = 113/148 (76.35%), Postives = 131/148 (88.51%), Query Frame = 3 Query: 294 KHAVDNPDEIASMVEMSTRNSTERRKLGYFS-CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 +HAV +P+EIA+MV+MS RNST RRKLG+FS C TGNPIDDCWRCD WH+ RKRLADC IGFGRNA+GGRDGR+Y+VTDP D DPV PKPGTLR+AVIQD+PLWIVFKRDMVI L QELI+NSF+T+DGRG NVHIA G C+T+Q+V Sbjct: 34 EHAVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYV 181
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.934e-61 Identity = 105/144 (72.92%), Postives = 123/144 (85.42%), Query Frame = 3 Query: 303 VDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 V +P+ + V S RRKLG+FSCG+GNPIDDCWRCD +W KNRKRLADCGIGFG+NAIGGRDG YVVTDP +DDPVNP+PGTLR+AVIQD+PLWI+FKRDM IQLK+ELI+NSF+TLDGRGA+VHI+ G CITIQ+V Sbjct: 50 VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYV 193
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.447e-56 Identity = 99/145 (68.28%), Postives = 121/145 (83.45%), Query Frame = 3 Query: 303 VDNPDEIASMVEMSTRNSTE-RRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQFV 734 V +P+ + V S S RRKLGY SC TGNPIDDCWRCD +W ++R+RLADC IGFG+NAIGGRDGR YVVTD +D+PV+PKPGTLRHAV+QD+PLWI+F+RDM IQLK+ELI+NSF+T+DGRGA+VHI+ G CITIQ+V Sbjct: 27 VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYV 171
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56 Identity = 100/140 (71.43%), Postives = 115/140 (82.14%), Query Frame = 3 Query: 312 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGGCITIQF 731 P I + V S S RR LGY SCGTGNPIDDCWRCD NW NR+RLADC IGFG+NA+GGR+GR YVVTDP +DDPVNP PGTLR+AVIQD+PLWI+FKRDMVIQL+QEL++NS +T+DGRG NVHI NG CITI + Sbjct: 26 PHAIVNEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHY 163 The following BLAST results are available for this feature:
BLAST of FC925138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925138 ID=FC925138; Name=FC925138; organism=Citrus clementina; type=EST; length=735bpback to top |