FC925264

Overview
NameFC925264
Unique NameFC925264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1971 contig Ccv1_Contig1971:1..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.534e-51
Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 2
Query:  410 LEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            +EW KKDKRR LHVVYRVGDLDRTI+FYTEC GMK+LRKRD+PEEKY+NAFLG+GPE S+FV+ELTYNYGV  YDIGTGFGHF I+  DV+K VE ++AKGG VTREPGPVKGG +V
Sbjct:    8 VEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSV 124          

HSP 2 Score: 94.3597 bits (233), Expect = 7.443e-19
Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 2
Query:  440 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIK----AKGGKVTREPGPVKGGNT 757
            +  V+ RVGDLDR +KF  + LGM+LLR+ + PE   T   +GY  E    V+ELTYNYGV +Y  G  +    I  DDV K+ E++K      GGK+TRE GP+ G  T
Sbjct:  148 LCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGT 256          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 9.014e-49
Identity = 91/118 (77.12%), Postives = 102/118 (86.44%), Query Frame = 2
Query:  410 LEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAK-GGKVTREPGPVKGGNTV 760
            LEW KKDK+R+LH VYRVGDLDRTIK YTEC GMKLLRKRD+PEEKYTNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA +DV K  E IK+    K+TREPGPVKGG+TV
Sbjct:   15 LEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTV 132          

HSP 2 Score: 119.013 bits (297), Expect = 2.822e-26
Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  440 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELI----KAKGGKVTREPGPVKGGNT 757
            +  V+ RVGDLDR+IKFY + LGMKLLRK+D+P+ KYT A LGY  ED   VIELTYNYGV +Y  G  +    I  +DV K+ E +    K  GGK+ R+PGP+ G NT
Sbjct:  156 LCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNT 265          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TV
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTV 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TV
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTV 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TV
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTV 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.666e-32
Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            ++LH + RVGDLDR+IKFY + LGM+LLR  + PE KYT AFLGY   +S   IELTYN+GVDKY+ GT +GH  I VDD+  T E ++A GG VTRE GPVKGG+TV
Sbjct:    2 QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTV 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            R+LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GV+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTI 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            R+LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GV+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTI 109          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.308e-31
Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = 2
Query:  437 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNT 757
            R+LH + RVGDLD++IKFYTE +GM+LLR  +  E +YT AF+GYG E    VIELTYN+G  +YD+GT FGH  I VDD+  T + IKA GG VTRE GPVKGG T
Sbjct:    5 RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTT 111          
BLAST of FC925264 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.708e-31
Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 2
Query:  440 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 760
            +LH + RVGDLD++++FY + LGM LLRK+D P  ++T AF+GYG E  + VIELT+N+G DKYD+G GFGH  + V+D+  T + I+ KGGKV REPGP+K G TV
Sbjct:    3 LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTV 109          
The following BLAST results are available for this feature:
BLAST of FC925264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LGUL_BRAOG2.534e-5177.78Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_ORYSJ9.014e-4977.12Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_SHIFL4.065e-3361.11Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI4.065e-3361.11Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO574.065e-3361.11Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
LGUL_HAEIN7.666e-3261.11Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_SALTY1.001e-3158.33Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.001e-3158.33Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_VIBPA1.308e-3160.75Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_SYNY31.708e-3156.07Probable lactoylglutathione lyase OS=Synechocystis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF02FM1 TF Citrus clementina cDNA clone KN0AAP3YF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925264 ID=FC925264; Name=FC925264; organism=Citrus clementina; type=EST; length=762bp
CACTAATCAGTAAACCAATCTTCTCTGCTGTGAAGTGTTAACCTCTTTCT
TTGACGACTGCACAGCATCAGAAGCTGAGGGAGTGAGTGCAGTGAGCTGA
GTGAAGGCGAGCGAGAATCAATAAGTAAAACAATAGGAGATGGTAAGGAT
AATATCAATGGCGTCCTCAATTCGGCCTTCACTTTCCACCTTCAGATTCT
CTTCCTCCTCCCGTTTTGGACTCCCTCTCTCCTCCTTTACTCCTTCACGC
AACCTCGTTTTCTCTCCCCTTGCCAGCGCTGTCCCGCAGTCGCAATTATT
CGGTCTGAGAGCTGCTAAGCCCTTGAGAGGAGATGTGAACAGCACAGGGG
TGGCGTCGTCGGCTGGGAATGCAGCGCAGGCAAGCACGAGTGCTGCTCAT
GAAAGTGCCCTGGAATGGGTCAAGAAAGACAAAAGAAGAATGCTTCATGT
TGTTTATCGTGTTGGAGATTTGGACAGGACGATTAAATTCTACACTGAGT
GCCTCGGGATGAAGTTGCTCCGTAAACGTGACATACCAGAGGAGAAATAT
ACAAATGCGTTTCTTGGATACGGACCAGAAGATTCTCACTTTGTTATTGA
ACTCACTTACAATTATGGAGTTGACAAGTATGATATCGGAACTGGATTTG
GCCATTTCGGTATTGCTGTGGATGATGTTGCCAAGACTGTTGAACTCATA
AAGGCTAAAGGAGGAAAAGTAACCCGAGAACCTGGTCCTGTCAAAGGTGG
CAATACTGTGAT
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