FC925328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.651e-46 Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 353 MTK TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.462e-46 Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 353 MTK TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+ Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.931e-45 Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 350 MTK TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.530e-45 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 353 MTK TKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES Sbjct: 1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.233e-44 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 350 M K TKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.043e-42 Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS-TIRRLREQTE 350 M K TKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS TIRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.722e-37 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 350 M K TKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KRKAVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_OSTTA (60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.458e-36 Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 350 M K TKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KR+AVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_CRYST (60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 5.186e-34 Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 353 M K TKK GIVGKYGTRYGASLRK +KKME++QHSKY C+FCGK A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE ES Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_DICDI (60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.845e-31 Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = 3 Query: 78 MTKTTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 341 M K TKK G+VGKYGTRYGASLRKQ+KKME++QH Y C FCGK AV+R +VGIW C C KV AGGA+T++TA+ TVRSTIRRLRE Sbjct: 1 MAKRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCRKVLAGGAWTMSTAAGATVRSTIRRLRE 88 The following BLAST results are available for this feature:
BLAST of FC925328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925328 ID=FC925328; Name=FC925328; organism=Citrus clementina; type=EST; length=528bpback to top |