FC925331

Overview
NameFC925331
Unique NameFC925331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1981 contig Ccv1_Contig1981:2..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.374e-49
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRV 384
            QSRRDDLESLGY+L+YFL+GSLPWQGLKA TKKQKY++I EKKVST IE LC+ +P+EFASYFHYC+SL FD +PDY +LKR+F DLF REG+ FD+VFDWTILKYQQ+Q T      P SR  N  V
Sbjct:  190 QSRRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLT-----APPSRALNPAV 312          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.044e-42
Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL 354
            QSRRDDLE+LGYVL+YF RGSLPWQGLKA TKK KYDKI EKK+STPIEVLCK  P EF +Y +YC+SL F+ RPDY +L+RLF DLF REGY +DF+FDWT L  ++ ++ + + ++
Sbjct:  190 QSRRDDLEALGYVLMYFNRGSLPWQGLKATTKKDKYDKIMEKKMSTPIEVLCKQFPFEFITYLNYCRSLRFEDRPDYSYLRRLFKDLFFREGYQYDFIFDWTFLHAERERERQRRSMV 307          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1_TOXGO (Casein kinase I OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.965e-42
Identity = 75/113 (66.37%), Postives = 93/113 (82.30%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTK 339
            QSRRDDLE+LGYVL+YF RGSLPWQGLKA TKK KYDKI EKK+STPIE+LCK  P EF +Y +YC+SL F+ RPDY +L+RLF DLF REGY +DF+FDWT +  ++ + ++
Sbjct:  190 QSRRDDLEALGYVLMYFNRGSLPWQGLKATTKKDKYDKIMEKKMSTPIEILCKHFPFEFITYLNYCRSLRFEDRPDYAYLRRLFKDLFFREGYQYDFIFDWTFINTEKDRASR 302          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.965e-42
Identity = 84/184 (45.65%), Postives = 127/184 (69.02%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++ + ++ L   R   +R +P   + +L+G  + + S  +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRAAEDAERERREREERLRHPRNPAARGLPSTASGRLRGTQEVTPSTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.965e-42
Identity = 79/143 (55.24%), Postives = 107/143 (74.83%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRVMPMRTDKLKGVNDAS 429
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+   +  +  D     R  + R+   R    +G+  AS
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRTAEEAD--RERRERDERMRHSRNPAARGIPAAS 330          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 5.179e-42
Identity = 84/184 (45.65%), Postives = 127/184 (69.02%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++ + ++ L  +R    R +P   + +L+G  + + S  +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAAEDAERERREREERLRHTRNPAVRGLPSTASGRLRGTQEVTPSTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_HUMAN (Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
The following BLAST results are available for this feature:
BLAST of FC925331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1D_ARATH4.374e-4970.31Casein kinase I isoform delta-like OS=Arabidopsis ... [more]
KC1_EIMTE1.044e-4265.25Casein kinase I OS=Eimeria tenella PE=2 SV=1[more]
KC1_TOXGO3.965e-4266.37Casein kinase I OS=Toxoplasma gondii PE=2 SV=1[more]
KC1D_XENTR3.965e-4245.65Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1DB_DANRE3.965e-4255.24Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]
KC1D_XENLA5.179e-4245.65Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1D_RAT6.764e-4245.65Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB6.764e-4245.65Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE6.764e-4245.65Casein kinase I isoform delta OS=Mus musculus GN=C... [more]
KC1D_HUMAN6.764e-4245.65Casein kinase I isoform delta OS=Homo sapiens GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG07FM1 TF Citrus clementina cDNA clone KN0AAP3YG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925331 ID=FC925331; Name=FC925331; organism=Citrus clementina; type=EST; length=596bp
CAAAGCCGTCGGGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTT
TTTACGAGGAAGCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGC
AAAAGTATGACAAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTC
CTTTGCAAGTCTCATCCTGCGGAATTTGCATCTTATTTCCATTATTGCCA
ATCTTTAACCTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTTTGT
TCCATGACTTGTTTTCTCGAGAAGGATATGATTTTGATTTTGTGTTTGAC
TGGACCATTCTCAAGTACCAGCAGACACAAAAGACGAAGTCACAGGATTT
GCTGCCAGCTTCTAGAGTGACTAACAGTCGGGTAATGCCAATGCGCACTG
ATAAGCTTAAAGGAGTCAATGACGCTTCTTGTTCAGCAGAGGTTCTGGAG
TGCAGAGGATCATATAATCGCACTCGCCCAGATGCAGATATGCAGCATAG
GCCATCAGTAGCTGAGAAAATGAGTTCTGATCATCAATTTGGGAAACATA
GTATGGGCAATGCATCAATTCCGTCTGCTTCAATTGTTCTGCCCCA
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